SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010853
Gene Symbol: PM20D2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.89153153G>C COSM295673 TCGA-AA-3852-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6876-3p gtgttcAGACAGCaa AGCUGUCU m7b Disrupted HHKTA_32970_NM_001010853|817|856|2.24993293469137|0.54122735225472
hsa-miR-6818-5p gtgtTCACACAgcaa UUGUGUGA m7b Created HHKTA_32970_NM_001010853|817|856|2.24993293469137|0.54122735225472
hsa-miR-626 gtgttcAGACAGCaa AGCUGUCU m7b Disrupted HHKTA_32970_NM_001010853|817|856|2.24993293469137|0.54122735225472
hsa-miR-4539 gtGTTCAGacagcaa GCUGAACU m6b Disrupted HHKTA_32970_NM_001010853|817|856|2.24993293469137|0.54122735225472
hsa-miR-3120-5p gtgttCAGACAGcaa CCUGUCUG m7b Disrupted HHKTA_32970_NM_001010853|817|856|2.24993293469137|0.54122735225472

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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