SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001009922
Gene Symbol: RCHY1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.75509236C>T COSM1310254 TCGA-DK-A1AC-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3682-3p agATCATCAactaga UGAUGAUA m7a (m7a->m6a) HPKTA_46697_G50405.1_76434439
hsa-miR-569 agatCATTAACTaga AGUUAAUG m8a Created HPKTA_46697_G50405.1_76434439
hsa-miR-580-5p agATCATTAactaga UAAUGAUU m7a (m6a->m7a) HPKTA_46697_G50405.1_76434439

Mutation Mutation ID Sample Name Cancer Type
chr4:g.75509226G>A COSM1328403 TCGA-61-1733-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-5p ctagatCACTTTaaa AAAAGUGC m6b Created HPKTA_46697_G50405.1_76434439
hsa-miR-106b-5p ctagatCACTTTAaa UAAAGUGC m7a Created HPKTA_46697_G50405.1_76434439
hsa-miR-1245a ctaGATCACTTtaaa AAGUGAUC m8a Created HPKTA_46697_G50405.1_76434439
hsa-miR-17-5p ctagatCACTTTaaa CAAAGUGC m6b Created HPKTA_46697_G50405.1_76434439
hsa-miR-20a-5p ctagatCACTTTAaa UAAAGUGC m7a Created HPKTA_46697_G50405.1_76434439
hsa-miR-20b-5p ctagatCACTTTaaa CAAAGUGC m6b Created HPKTA_46697_G50405.1_76434439
hsa-miR-3609 ctagaTCACTTTaaa CAAAGUGA m7b Created HPKTA_46697_G50405.1_76434439
hsa-miR-4796-3p ctagatCACTTTAaa UAAAGUGG m7a Created HPKTA_46697_G50405.1_76434439
hsa-miR-518a-3p ctagatCGCTTTaaa GAAAGCGC m6b Disrupted HPKTA_46697_G50405.1_76434439
hsa-miR-518b ctagatCGCTTTaaa CAAAGCGC m6b Disrupted HPKTA_46697_G50405.1_76434439
hsa-miR-518c-3p ctagatCGCTTTaaa CAAAGCGC m6b Disrupted HPKTA_46697_G50405.1_76434439
hsa-miR-518d-3p ctagatCGCTTTaaa CAAAGCGC m6b Disrupted HPKTA_46697_G50405.1_76434439
hsa-miR-518f-3p ctagatCGCTTTaaa GAAAGCGC m6b Disrupted HPKTA_46697_G50405.1_76434439
hsa-miR-519d-3p ctagatCACTTTaaa CAAAGUGC m6b Created HPKTA_46697_G50405.1_76434439
hsa-miR-526b-3p ctagatCACTTTaaa GAAAGUGC m6b Created HPKTA_46697_G50405.1_76434439
hsa-miR-548ah-5p ctagaTCACTTTaaa AAAAGUGA m7b Created HPKTA_46697_G50405.1_76434439
hsa-miR-8079 ctaGATCACTttaaa CAGUGAUC m7b Created HPKTA_46697_G50405.1_76434439
hsa-miR-93-5p ctagatCACTTTaaa CAAAGUGC m6b Created HPKTA_46697_G50405.1_76434439
hsa-miR-9-3p ctagatcGCTTTAaa AUAAAGCU m6b Disrupted HPKTA_46697_G50405.1_76434439

Mutation Mutation ID Sample Name Cancer Type
chr4:g.75508921T>G COSM2831606 COLO678 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125b-2-3p agACTTGTGAagaat UCACAAGU m8a Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-3691-3p aGACTTGGgaagaat ACCAAGUC m7b Created HPKTA_46696_G50404.1_76434130
hsa-miR-412-3p agacttGTGAAGaat ACUUCACC m6b Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-4457 agaCTTGTGAagaat UCACAAGG m7a Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-513b-5p agaCTTGTGAAgaat UUCACAAG m8a Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-6754-3p agacttGTGAAGAat UCUUCACC m7a Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-6814-5p agaCTTGGGAagaat UCCCAAGG m7a Created HPKTA_46696_G50404.1_76434130
hsa-miR-6837-3p agacttGTGAAGaat CCUUCACU m6b Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-6875-3p agacttgGGAAGAAt AUUCUUCC m7b Created HPKTA_46696_G50404.1_76434130
hsa-miR-6882-5p aGACTTGTgaagaat UACAAGUC m7b Disrupted HPKTA_46696_G50404.1_76434130

Mutation Mutation ID Sample Name Cancer Type
chr4:g.75508917G>T COSM1057541 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p ttgtgaaGAATGTag AACAUUCA m6b Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-181b-5p ttgtgaaGAATGTag AACAUUCA m6b Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-181c-5p ttgtgaaGAATGTag AACAUUCA m6b Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-181d-5p ttgtgaaGAATGTag AACAUUCA m6b Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-323a-3p ttgtgaaTAATGTag CACAUUAC m6b Created HPKTA_46696_G50404.1_76434130
hsa-miR-412-3p ttGTGAAGaatgtag ACUUCACC m6b Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-4262 ttgtgaaGAATGTag GACAUUCA m6b Disrupted HPKTA_46696_G50404.1_76434130
hsa-miR-6754-3p ttGTGAAGAatgtag UCUUCACC m7a (m7a->m6a) HPKTA_46696_G50404.1_76434130
hsa-miR-6837-3p ttGTGAAGaatgtag CCUUCACU m6b Disrupted HPKTA_46696_G50404.1_76434130
Mutation Mutation ID Sample Name Cancer Type
chr4:g.75508908A>G COSM1057539 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr4:g.75490693G>A COSM1057535 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20b-3p ggCTACAGatgtcca ACUGUAGU m6b Disrupted HPKTA_46695_G50403.1_76415891
hsa-miR-3137 gGCTACAGAtgtcca UCUGUAGC m8a (m8a->m7a) HPKTA_46695_G50403.1_76415891
hsa-miR-3674 ggCTACAAatgtcca AUUGUAGA m6b Created HPKTA_46695_G50403.1_76415891

Mutation Mutation ID Sample Name Cancer Type
chr4:g.75490673T>G COSM3993782 TCGA-DW-7840-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4536-3p tATGCACGctgcttt UCGUGCAU m7b Created HPKTA_46695_G50403.1_76415891
hsa-miR-503-5p tatgcaCGCTGCTtt UAGCAGCG m7b Created HPKTA_46695_G50403.1_76415891
hsa-miR-759 tatgCACTCTGCttt GCAGAGUG m8a Disrupted HPKTA_46695_G50403.1_76415891

Mutation Mutation ID Sample Name Cancer Type
chr4:g.75490669C>T COSM84860 Pa16C [pancreas][NS][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4422 cactcTGCTTTagat AAAAGCAU m6b Disrupted HPKTA_46695_G50403.1_76415891
hsa-miR-4509 cactctgCTTTAGat ACUAAAGG m6b Disrupted HPKTA_46695_G50403.1_76415891
hsa-miR-4797-5p cACTCTGTtttagat GACAGAGU m7b Created HPKTA_46695_G50403.1_76415891
hsa-miR-6835-3p cactcTGCTTTagat AAAAGCAC m6b Disrupted HPKTA_46695_G50403.1_76415891

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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