SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001009922
Gene Symbol: RCHY1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.75508896G>T COSM4720884 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-515-5p gtTTGGAGAAtatta UUCUCCAA m8a Disrupted HHHNA_17418_RCHY1|NM_001009922|exon_CDS|-5.59357848220354|1.00444466654305
hsa-miR-519d-5p gTTTGGAGaatatta CCUCCAAA m7b Disrupted HHHNA_17418_RCHY1|NM_001009922|exon_CDS|-5.59357848220354|1.00444466654305
hsa-miR-519e-5p gtTTGGAGAAtatta UUCUCCAA m8a Disrupted HHHNA_17418_RCHY1|NM_001009922|exon_CDS|-5.59357848220354|1.00444466654305
hsa-miR-5695 gtTTGGAGaatatta ACUCCAAG m6b Disrupted HHHNA_17418_RCHY1|NM_001009922|exon_CDS|-5.59357848220354|1.00444466654305
hsa-miR-656-3p gtttggATAATATTa AAUAUUAU m8a Created HHHNA_17418_RCHY1|NM_001009922|exon_CDS|-5.59357848220354|1.00444466654305

Mutation Mutation ID Sample Name Cancer Type
chr4:g.75508879A>G COSM1057537 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-5p gcgatatGTGCCATt UAUGGCAC m7b Created HHHNA_17418_RCHY1|NM_001009922|exon_CDS|-5.59357848220354|1.00444466654305

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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