SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008895
Gene Symbol: CUL4A
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.113260690G>C COSM1741973 313 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p taatGAAGATGagaa CAUCUUCC m7a Disrupted HPKMA_4086_G4790.1_113914979
hsa-miR-452-3p taatgaAGATGAGaa CUCAUCUG m7a Disrupted HPKMA_4086_G4790.1_113914979
hsa-miR-6853-3p tAATGAACAtgagaa UGUUCAUU m8a (m7a->m8a) HPKMA_4086_G4790.1_113914979
hsa-miR-6870-3p taatgaaGATGAGaa GCUCAUCC m6b Disrupted HPKMA_4086_G4790.1_113914979

Mutation Mutation ID Sample Name Cancer Type
chr13:g.113260687G>A COSM4835420 TCGA-Q1-A73O-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p gaataatGAAGATGa CAUCUUCC m7a Disrupted HPKMA_4086_G4790.1_113914979
hsa-miR-4528 gaATAATGAagatga UCAUUAUA m7a (m7a->m6a) HPKMA_4086_G4790.1_113914979
hsa-miR-4795-3p gAATAATAaagatga AUAUUAUU m7b Created HPKMA_4086_G4790.1_113914979
hsa-miR-141-5p gaataatGAAGATGa CAUCUUCC m7a Disrupted HPKMA_4086_G4790.1_113914979
hsa-miR-4528 gaATAATGAagatga UCAUUAUA m7a (m7a->m6a) HPKMA_4086_G4790.1_113914979
hsa-miR-4795-3p gAATAATAaagatga AUAUUAUU m7b Created HPKMA_4086_G4790.1_113914979

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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