SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008895
Gene Symbol: CUL4A
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr13:g.113260709C>G COSM3987315 TCGA-GL-8500-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr13:g.113260690G>C COSM1741973 313 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p taatGAAGATGagaa CAUCUUCC m7a Disrupted HHHNE_4373_CUL4A|NM_001008895|exon_CDS|-5.79640117491114|0.110942889551676
hsa-miR-452-3p taatgaAGATGAGaa CUCAUCUG m7a Disrupted HHHNE_4373_CUL4A|NM_001008895|exon_CDS|-5.79640117491114|0.110942889551676
hsa-miR-6853-3p tAATGAACAtgagaa UGUUCAUU m8a (m7a->m8a) HHHNE_4373_CUL4A|NM_001008895|exon_CDS|-5.79640117491114|0.110942889551676
hsa-miR-6870-3p taatgaaGATGAGaa GCUCAUCC m6b Disrupted HHHNE_4373_CUL4A|NM_001008895|exon_CDS|-5.79640117491114|0.110942889551676

Mutation Mutation ID Sample Name Cancer Type
chr13:g.113260687G>A COSM4835421 TCGA-Q1-A73O-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p gaataatGAAGATGa CAUCUUCC m7a Disrupted HHHNE_4373_CUL4A|NM_001008895|exon_CDS|-5.79640117491114|0.110942889551676
hsa-miR-4528 gaATAATGAagatga UCAUUAUA m7a (m7a->m6a) HHHNE_4373_CUL4A|NM_001008895|exon_CDS|-5.79640117491114|0.110942889551676
hsa-miR-4795-3p gAATAATAaagatga AUAUUAUU m7b Created HHHNE_4373_CUL4A|NM_001008895|exon_CDS|-5.79640117491114|0.110942889551676
hsa-miR-141-5p gaataatGAAGATGa CAUCUUCC m7a Disrupted HHHNE_4373_CUL4A|NM_001008895|exon_CDS|-5.79640117491114|0.110942889551676
hsa-miR-4528 gaATAATGAagatga UCAUUAUA m7a (m7a->m6a) HHHNE_4373_CUL4A|NM_001008895|exon_CDS|-5.79640117491114|0.110942889551676
hsa-miR-4795-3p gAATAATAaagatga AUAUUAUU m7b Created HHHNE_4373_CUL4A|NM_001008895|exon_CDS|-5.79640117491114|0.110942889551676

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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