SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008727
Gene Symbol: ZNF121

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.9566143T>G COSM3543967 TCGA-EE-A2MD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-127-5p tgctacAGCTTCAca CUGAAGCU m7b Created HPCB1_20279_G25491.1_9676828
hsa-miR-3137 tGCTACAGcttcaca UCUGUAGC m7b Created HPCB1_20279_G25491.1_9676828
hsa-miR-4426 tgctaCATCTTCaca GAAGAUGG m7a Disrupted HPCB1_20279_G25491.1_9676828
hsa-miR-4647 tgctaCATCTTCaca GAAGAUGG m7a Disrupted HPCB1_20279_G25491.1_9676828
hsa-miR-4699-5p tgctacATCTTCaca AGAAGAUU m6b Disrupted HPCB1_20279_G25491.1_9676828

Mutation Mutation ID Sample Name Cancer Type
chr19:g.9566045G>A COSM1398309 TCGA-AZ-6598-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3674 aTCTACAAaaacatg AUUGUAGA m7b Created HPCB1_20278_G25490.1_9676727
hsa-miR-3686 atcTACAGAaacatg AUCUGUAA m6b Disrupted HPCB1_20278_G25490.1_9676727
hsa-miR-4307 atctacaAAAACATg AAUGUUUU m7b Created HPCB1_20278_G25490.1_9676727
hsa-miR-4652-3p atctACAGAAacatg GUUCUGUU m6b Disrupted HPCB1_20278_G25490.1_9676727
hsa-miR-3137 atCTACAGAaacatg UCUGUAGC m7a (m7a->m6a) HPCB1_20278_G25490.1_9676727
hsa-miR-20b-3p atCTACAGaaacatg ACUGUAGU m6b Disrupted HPCB1_20278_G25490.1_9676727

Mutation Mutation ID Sample Name Cancer Type
chr19:g.9565947AC>C COSM1398307 TCGA-A6-3809-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4302 tttaaaaCACACTGa CCAGUGUG m7b Created HPCB1_20277_G25489.1_9676636

Mutation Mutation ID Sample Name Cancer Type
chr19:g.9565774A>G COSN7452438 8068564 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376c-3p atacTCTATGTgtcc AACAUAGA m7b Disrupted HPCB1_20275_G25487.1_9676446
hsa-miR-4789-3p atactcTATGTGTcc CACACAUA m7b Disrupted HPCB1_20275_G25487.1_9676446
hsa-miR-4797-5p atACTCTGTgtgtcc GACAGAGU m7b (m6b->m7b) HPCB1_20275_G25487.1_9676446
hsa-miR-642a-3p atactctATGTGTCc AGACACAU m7b Disrupted HPCB1_20275_G25487.1_9676446
hsa-miR-642b-3p atactctATGTGTCc AGACACAU m7b Disrupted HPCB1_20275_G25487.1_9676446
hsa-miR-8485 atactcTGTGTGTcc CACACACA m7b Created HPCB1_20275_G25487.1_9676446

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser