SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008566
Gene Symbol: TPST2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.26561318C>A COSN15322183 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-3p ACACTACAgaatgtg UGUAGUGU m8a Created HHRBL_9439_BCBL1-2of3-SCL_13493
hsa-miR-20b-3p acACTACAGaatgtg ACUGUAGU m7b (m6b->m7b) HHRBL_9439_BCBL1-2of3-SCL_13493
hsa-miR-3137 acaCTACAGAatgtg UCUGUAGC m7a Created HHRBL_9439_BCBL1-2of3-SCL_13493
hsa-miR-3686 acacTACAGAatgtg AUCUGUAA m6b Created HHRBL_9439_BCBL1-2of3-SCL_13493
hsa-miR-4778-5p acactACAGAATgtg AAUUCUGU m7b Created HHRBL_9439_BCBL1-2of3-SCL_13493

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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