SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008539
Gene Symbol: SLC7A2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.17565109C>T COSM4476338 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548ag ctcagtTTACCTTTc AAAGGUAA m8a Created HPRO6_73405_G87691.1_17422630
hsa-miR-203b-3p ctCAGTTCAcctttc UUGAACUG m7b (m7b->m6b) HPRO6_73405_G87691.1_17422630
hsa-miR-548ai ctcagtTTACCTTTc AAAGGUAA m8a Created HPRO6_73405_G87691.1_17422630
hsa-miR-548av-3p ctCAGTTTacctttc AAAACUGC m6b Created HPRO6_73405_G87691.1_17422630
hsa-miR-548ba ctcagtTTACCTTTc AAAGGUAA m8a Created HPRO6_73405_G87691.1_17422630
hsa-miR-548g-3p ctCAGTTTacctttc AAAACUGU m6b Created HPRO6_73405_G87691.1_17422630
hsa-miR-548m ctcagttTACCTTTc CAAAGGUA m7b Created HPRO6_73405_G87691.1_17422630
hsa-miR-570-5p ctcagtTTACCTTTc AAAGGUAA m8a Created HPRO6_73405_G87691.1_17422630
hsa-miR-548ag ctcagtTTACCTTTc AAAGGUAA m8a Created HPRO6_73405_G87691.1_17422630
hsa-miR-203b-3p ctCAGTTCAcctttc UUGAACUG m7b (m7b->m6b) HPRO6_73405_G87691.1_17422630
hsa-miR-548ai ctcagtTTACCTTTc AAAGGUAA m8a Created HPRO6_73405_G87691.1_17422630
hsa-miR-548av-3p ctCAGTTTacctttc AAAACUGC m6b Created HPRO6_73405_G87691.1_17422630
hsa-miR-548ba ctcagtTTACCTTTc AAAGGUAA m8a Created HPRO6_73405_G87691.1_17422630
hsa-miR-548g-3p ctCAGTTTacctttc AAAACUGU m6b Created HPRO6_73405_G87691.1_17422630
hsa-miR-548m ctcagttTACCTTTc CAAAGGUA m7b Created HPRO6_73405_G87691.1_17422630
hsa-miR-570-5p ctcagtTTACCTTTc AAAGGUAA m8a Created HPRO6_73405_G87691.1_17422630

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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