SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008495
Gene Symbol: TMEM64

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.90631704A>T COSM1569512 TCGA-AF-5654-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-3p ctagatTTCTGATct CAUCAGAA m7b Created HPSD3_9981_G13536.1_91643905
hsa-miR-383-5p ctagattTCTGATCt AGAUCAGA m7b Created HPSD3_9981_G13536.1_91643905
hsa-miR-2115-3p ctagatTTCTGATct CAUCAGAA m7b Created HPSD3_9981_G13536.1_91643905
hsa-miR-383-5p ctagattTCTGATCt AGAUCAGA m7b Created HPSD3_9981_G13536.1_91643905
Mutation Mutation ID Sample Name Cancer Type
chr8:g.90631702T>G COSM2790355 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr8:g.90631682A>T COSM3942813 ESCC-207T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-3p cccaactTTCTGATg CAUCAGAA m7b Created HPSD3_9981_G13536.1_91643905
hsa-miR-2115-3p cccaactTTCTGATg CAUCAGAA m7b Created HPSD3_9981_G13536.1_91643905

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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