SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008495
Gene Symbol: TMEM64

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.90631682A>T COSM3942813 ESCC-207T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-3p cccaactTTCTGATg CAUCAGAA m7b Created HPRT3_25296_G33789.1_91643917
hsa-miR-2115-3p cccaactTTCTGATg CAUCAGAA m7b Created HPRT3_25296_G33789.1_91643917

Mutation Mutation ID Sample Name Cancer Type
chr8:g.90625822G>A COSM3835111 TCGA-AN-A046-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27b-5p gttcatcAAGCTCaa AGAGCUUA m6b Created HPRT3_25295_G33788.1_91638051
hsa-miR-3670 gttcatcGAGCTCaa AGAGCUCA m6b Disrupted HPRT3_25295_G33788.1_91638051
hsa-miR-4453 gttcatCAAGCTCaa GAGCUUGG m7a Created HPRT3_25295_G33788.1_91638051
hsa-miR-4538 gttcatCAAGCTCaa GAGCUUGG m7a Created HPRT3_25295_G33788.1_91638051
hsa-miR-27b-5p gttcatcAAGCTCaa AGAGCUUA m6b Created HPRT3_25295_G33788.1_91638051
hsa-miR-3670 gttcatcGAGCTCaa AGAGCUCA m6b Disrupted HPRT3_25295_G33788.1_91638051
hsa-miR-4453 gttcatCAAGCTCaa GAGCUUGG m7a Created HPRT3_25295_G33788.1_91638051
hsa-miR-4538 gttcatCAAGCTCaa GAGCUUGG m7a Created HPRT3_25295_G33788.1_91638051

Mutation Mutation ID Sample Name Cancer Type
chr8:g.90625805A>T COSM1489471 TCGA-E9-A1RF-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20a-3p ggaattgAATGCAGc ACUGCAUU m7b Disrupted HPRT3_25295_G33788.1_91638051
hsa-miR-4666a-3p ggaATTGTATGcagc CAUACAAU m8a Created HPRT3_25295_G33788.1_91638051
hsa-miR-5689 ggaatTGTATGCagc AGCAUACA m7b Created HPRT3_25295_G33788.1_91638051
hsa-miR-7849-3p ggAATTGTatgcagc GACAAUUG m6b Created HPRT3_25295_G33788.1_91638051
hsa-miR-20a-3p ggaattgAATGCAGc ACUGCAUU m7b Disrupted HPRT3_25295_G33788.1_91638051
hsa-miR-4666a-3p ggaATTGTATGcagc CAUACAAU m8a Created HPRT3_25295_G33788.1_91638051
hsa-miR-5689 ggaatTGTATGCagc AGCAUACA m7b Created HPRT3_25295_G33788.1_91638051
hsa-miR-7849-3p ggAATTGTatgcagc GACAAUUG m6b Created HPRT3_25295_G33788.1_91638051

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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