SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008495
Gene Symbol: TMEM64

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.90625822G>A COSM258207 TCGA-AG-3892-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27b-5p gttcatcAAGCTCaa AGAGCUUA m6b Created HPKTA_60342_G65261.1_91638046
hsa-miR-3670 gttcatcGAGCTCaa AGAGCUCA m6b Disrupted HPKTA_60342_G65261.1_91638046
hsa-miR-4453 gttcatCAAGCTCaa GAGCUUGG m7a Created HPKTA_60342_G65261.1_91638046
hsa-miR-4538 gttcatCAAGCTCaa GAGCUUGG m7a Created HPKTA_60342_G65261.1_91638046
hsa-miR-4538 gttcatCAAGCTCaa GAGCUUGG m7a Created HPKTA_60342_G65261.1_91638046
hsa-miR-4453 gttcatCAAGCTCaa GAGCUUGG m7a Created HPKTA_60342_G65261.1_91638046
hsa-miR-3670 gttcatcGAGCTCaa AGAGCUCA m6b Disrupted HPKTA_60342_G65261.1_91638046
hsa-miR-27b-5p gttcatcAAGCTCaa AGAGCUUA m6b Created HPKTA_60342_G65261.1_91638046

Mutation Mutation ID Sample Name Cancer Type
chr8:g.90625805A>T COSM1489470 TCGA-E9-A1RF-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7849-3p ggAATTGTatgcagc GACAAUUG m6b Created HPKTA_60342_G65261.1_91638046
hsa-miR-5689 ggaatTGTATGCagc AGCAUACA m7b Created HPKTA_60342_G65261.1_91638046
hsa-miR-4666a-3p ggaATTGTATGcagc CAUACAAU m8a Created HPKTA_60342_G65261.1_91638046
hsa-miR-20a-3p ggaattgAATGCAGc ACUGCAUU m7b Disrupted HPKTA_60342_G65261.1_91638046
hsa-miR-4666a-3p ggaATTGTATGcagc CAUACAAU m8a Created HPKTA_60342_G65261.1_91638046
hsa-miR-20a-3p ggaattgAATGCAGc ACUGCAUU m7b Disrupted HPKTA_60342_G65261.1_91638046
hsa-miR-7849-3p ggAATTGTatgcagc GACAAUUG m6b Created HPKTA_60342_G65261.1_91638046
hsa-miR-5689 ggaatTGTATGCagc AGCAUACA m7b Created HPKTA_60342_G65261.1_91638046

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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