SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008495
Gene Symbol: TMEM64

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.90645687C>G COSM4412256 LP6005334-DNA_A04 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-132-5p agcGCCACGGTccgc ACCGUGGC m8a Disrupted HPKMA_14397_G16657.1_91657896
hsa-miR-4725-5p agcgcCAGGGTCcgc AGACCCUG m7b Created HPKMA_14397_G16657.1_91657896
hsa-miR-504-5p agcgcCAGGGTCcgc AGACCCUG m7b Created HPKMA_14397_G16657.1_91657896

Mutation Mutation ID Sample Name Cancer Type
chr8:g.90625596A>G COSN9687231 AOCS-150-3-1 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6895-3p tgggcAGAGACAagt UGUCUCUC m7a Disrupted HPKMA_14396_G16656.2_91637824
hsa-miR-6818-3p tgggcAGAGACAAgt UUGUCUCU m8a Disrupted HPKMA_14396_G16656.2_91637824
hsa-miR-4433b-5p tgggcaGGGACAagt AUGUCCCA m6b Created HPKMA_14396_G16656.2_91637824
hsa-miR-4646-3p tgggcaGGGACAAgt AUUGUCCC m7b Created HPKMA_14396_G16656.2_91637824
hsa-miR-593-3p tgggCAGAGACAagt UGUCUCUG m8a Disrupted HPKMA_14396_G16656.2_91637824
hsa-miR-670-5p tgggCAGGGACaagt GUCCCUGA m7a Created HPKMA_14396_G16656.2_91637824
hsa-miR-6752-3p tgGGCAGGGAcaagt UCCCUGCC m8a Created HPKMA_14396_G16656.2_91637824

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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