SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001008495
Gene Symbol: TMEM64

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.90645511T>A COSM4804757 CHC1531T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3141 gCCGCCCTgtgcttc GAGGGCGG m7b Disrupted HHHNA_21564_TMEM64|NM_001146273|exon_CDS|-4.23723175693069|-1.30325445944922
hsa-miR-4486 gcCGCCCAGtgcttc GCUGGGCG m7b (m6b->m7b) HHHNA_21564_TMEM64|NM_001146273|exon_CDS|-4.23723175693069|-1.30325445944922

Mutation Mutation ID Sample Name Cancer Type
chr8:g.90625785GT>T COSM392689 LUAD-YINHD [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125b-2-3p gtagCTTGTGAaatgg UCACAAGU m7a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-1305 gtagctTTGAAAtgg UUUUCAAC m6b Created HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-4457 gtagCTTGTGAaatgg UCACAAGG m7a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-513b-5p gtagCTTGTGAAatgg UUCACAAG m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-607 gtagcTTTGAAatgg GUUCAAAU m6b Created HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996

Mutation Mutation ID Sample Name Cancer Type
chr8:g.90625768C>A COSM1102356 TCGA-B5-A11N-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 ctgaaaTCTTCTCTg AGAGAAGA m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-205-3p CTGAAATCttctctg GAUUUCAG m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-3123 ctgaaatATTCTCTg CAGAGAAU m7b Created HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-4699-5p ctgaAATCTTCTctg AGAAGAUU m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-1253 ctgaaaTCTTCTCTg AGAGAAGA m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-205-3p CTGAAATCttctctg GAUUUCAG m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-3123 ctgaaatATTCTCTg CAGAGAAU m7b Created HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-4699-5p ctgaAATCTTCTctg AGAAGAUU m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996

Mutation Mutation ID Sample Name Cancer Type
chr8:g.90625767T>C COSM1155032 TCGA-BG-A0M4-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 tgaaaTCTTCTCTgg AGAGAAGA m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-3167 tGAAATCCTctctgg AGGAUUUC m8a (m7a->m8a) HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-3919 tgaaatcTTCTCTGg GCAGAGAA m7b Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-4699-5p tgaAATCTTCTctgg AGAAGAUU m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-6758-5p tgaaatCCTCTCTgg UAGAGAGG m7b Created HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-6856-5p tgaaatCCTCTCTgg AAGAGAGG m7b Created HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-876-5p tGAAATCCtctctgg UGGAUUUC m7b Created HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-1253 tgaaaTCTTCTCTgg AGAGAAGA m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-3167 tGAAATCCTctctgg AGGAUUUC m8a (m7a->m8a) HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-3919 tgaaatcTTCTCTGg GCAGAGAA m7b Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-4699-5p tgaAATCTTCTctgg AGAAGAUU m8a Disrupted HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-6758-5p tgaaatCCTCTCTgg UAGAGAGG m7b Created HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-6856-5p tgaaatCCTCTCTgg AAGAGAGG m7b Created HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996
hsa-miR-876-5p tGAAATCCtctctgg UGGAUUUC m7b Created HHHNA_21563_TMEM64|NM_001008495|exon_CDS|-4.71657742459394|2.14476864447996

Mutation Mutation ID Sample Name Cancer Type
chr8:g.90625596A>G COSN9687231 AOCS-150-3-1 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4433b-5p tgggcaGGGACAagt AUGUCCCA m6b Created HHHNA_21561_TMEM64|NM_001008495|exon_utr3|-3.96279914408115|1.77825706218824
hsa-miR-4646-3p tgggcaGGGACAAgt AUUGUCCC m7b Created HHHNA_21561_TMEM64|NM_001008495|exon_utr3|-3.96279914408115|1.77825706218824
hsa-miR-593-3p tgggCAGAGACAagt UGUCUCUG m8a Disrupted HHHNA_21561_TMEM64|NM_001008495|exon_utr3|-3.96279914408115|1.77825706218824
hsa-miR-670-5p tgggCAGGGACaagt GUCCCUGA m7a Created HHHNA_21561_TMEM64|NM_001008495|exon_utr3|-3.96279914408115|1.77825706218824
hsa-miR-6752-3p tgGGCAGGGAcaagt UCCCUGCC m8a Created HHHNA_21561_TMEM64|NM_001008495|exon_utr3|-3.96279914408115|1.77825706218824
hsa-miR-6818-3p tgggcAGAGACAAgt UUGUCUCU m8a Disrupted HHHNA_21561_TMEM64|NM_001008495|exon_utr3|-3.96279914408115|1.77825706218824
hsa-miR-6895-3p tgggcAGAGACAagt UGUCUCUC m7a Disrupted HHHNA_21561_TMEM64|NM_001008495|exon_utr3|-3.96279914408115|1.77825706218824
hsa-miR-4433b-5p tgggcaGGGACAagt AUGUCCCA m6b Created HHHNA_21562_TMEM64|NM_001008495|exon_utr3|-4.28341712568506|1.45012232412509
hsa-miR-4646-3p tgggcaGGGACAAgt AUUGUCCC m7b Created HHHNA_21562_TMEM64|NM_001008495|exon_utr3|-4.28341712568506|1.45012232412509
hsa-miR-593-3p tgggCAGAGACAagt UGUCUCUG m8a Disrupted HHHNA_21562_TMEM64|NM_001008495|exon_utr3|-4.28341712568506|1.45012232412509
hsa-miR-670-5p tgggCAGGGACaagt GUCCCUGA m7a Created HHHNA_21562_TMEM64|NM_001008495|exon_utr3|-4.28341712568506|1.45012232412509
hsa-miR-6752-3p tgGGCAGGGAcaagt UCCCUGCC m8a Created HHHNA_21562_TMEM64|NM_001008495|exon_utr3|-4.28341712568506|1.45012232412509
hsa-miR-6818-3p tgggcAGAGACAAgt UUGUCUCU m8a Disrupted HHHNA_21562_TMEM64|NM_001008495|exon_utr3|-4.28341712568506|1.45012232412509
hsa-miR-6895-3p tgggcAGAGACAagt UGUCUCUC m7a Disrupted HHHNA_21562_TMEM64|NM_001008495|exon_utr3|-4.28341712568506|1.45012232412509

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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