SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007593
Gene Symbol: SMPD1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.6394475G>A COSM930119 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-3p GTGGCACGccctgcc CGUGCCAC m8a Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1268a gtggCACGCCCtgcc CGGGCGUG m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1268b gtggCACGCCCtgcc CGGGCGUG m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4455 gtggCACACCCTgcc AGGGUGUG m8a Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6132 gtggcacGCCCTGCc AGCAGGGC m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6836-5p gtggcacGCCCTGCc CGCAGGGC m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1227-3p GTGGCACGccctgcc CGUGCCAC m8a Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1268a gtggCACGCCCtgcc CGGGCGUG m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1268b gtggCACGCCCtgcc CGGGCGUG m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4455 gtggCACACCCTgcc AGGGUGUG m8a Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6132 gtggcacGCCCTGCc AGCAGGGC m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6836-5p gtggcacGCCCTGCc CGCAGGGC m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318

Mutation Mutation ID Sample Name Cancer Type
chr11:g.6394474C>G COSM3935566 ESCC-083T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-3p tGTGGCACGccctgc CGUGCCAC m8a (m8a->m7a) HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1268a tgtggCACGCCCtgc CGGGCGUG m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1268b tgtggCACGCCCtgc CGGGCGUG m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-2861 tgtggCAGGCCCtgc GGGGCCUG m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-3918 tgtggcaGGCCCTGc ACAGGGCC m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4512 tgtggcAGGCCCTGc CAGGGCCU m8a Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4722-3p tgTGGCAGGccctgc ACCUGCCA m7b (m6b->m7b) HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4763-5p tgtGGCAGGCcctgc CGCCUGCC m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6727-3p tgTGGCAGGccctgc UCCUGCCA m7b (m6b->m7b) HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1227-3p tGTGGCACGccctgc CGUGCCAC m8a (m8a->m7a) HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1268a tgtggCACGCCCtgc CGGGCGUG m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1268b tgtggCACGCCCtgc CGGGCGUG m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-2861 tgtggCAGGCCCtgc GGGGCCUG m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-3918 tgtggcaGGCCCTGc ACAGGGCC m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4512 tgtggcAGGCCCTGc CAGGGCCU m8a Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4722-3p tgTGGCAGGccctgc ACCUGCCA m7b (m6b->m7b) HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4763-5p tgtGGCAGGCcctgc CGCCUGCC m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6727-3p tgTGGCAGGccctgc UCCUGCCA m7b (m6b->m7b) HHRBL_2399_BCBL1-2of3-SCL_5318

Mutation Mutation ID Sample Name Cancer Type
chr11:g.6394470G>A COSM4186343 BK0022 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-3p gccctGTGGCACGcc CGUGCCAC m8a Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-187-5p gcccTGTAGCacgcc GGCUACAA m6b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-221-3p gcccTGTAGCacgcc AGCUACAU m6b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-222-3p gcccTGTAGCacgcc AGCUACAU m6b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-3064-3p gcccTGTGGCAcgcc UUGCCACA m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-548v gccCTGTAGCacgcc AGCUACAG m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1227-3p gccctGTGGCACGcc CGUGCCAC m8a Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-187-5p gcccTGTAGCacgcc GGCUACAA m6b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-221-3p gcccTGTAGCacgcc AGCUACAU m6b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-222-3p gcccTGTAGCacgcc AGCUACAU m6b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-3064-3p gcccTGTGGCAcgcc UUGCCACA m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-548v gccCTGTAGCacgcc AGCUACAG m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318

Mutation Mutation ID Sample Name Cancer Type
chr11:g.6394461G>A COSM930118 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3158-3p accctcgAAGCCCTg AAGGGCUU m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-5088-5p accctcgGAGCCCTg CAGGGCUC m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-3158-3p accctcgAAGCCCTg AAGGGCUU m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-5088-5p accctcgGAGCCCTg CAGGGCUC m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318

Mutation Mutation ID Sample Name Cancer Type
chr11:g.6394448C>T COSM4035144 TCGA-CD-A4MG-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1262 ataagggTCACCCAc AUGGGUGA m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-328-3p ataAGGGCCAcccac CUGGCCCU m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-363-5p ataagggCCACCCac CGGGUGGA m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4483 ataagggCCACCCac GGGGUGGU m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4701-3p ataagggTCACCCAc AUGGGUGA m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4725-5p ataAGGGTCacccac AGACCCUG m6b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-504-5p ataAGGGTCacccac AGACCCUG m6b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-663b ataaGGGCCACCcac GGUGGCCC m8a Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6736-5p ataagggTCACCCAc CUGGGUGA m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6756-5p ataagggCCACCCac AGGGUGGG m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6766-5p ataagggCCACCCac CGGGUGGG m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6775-3p ataAGGGCCacccac AGGCCCUG m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6851-3p atAAGGGCCAcccac UGGCCCUU m8a Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-7973 ataaGGGTCACccac UGUGACCC m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-938 aTAAGGGCcacccac UGCCCUUA m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-1262 ataagggTCACCCAc AUGGGUGA m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-328-3p ataAGGGCCAcccac CUGGCCCU m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-363-5p ataagggCCACCCac CGGGUGGA m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4483 ataagggCCACCCac GGGGUGGU m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4701-3p ataagggTCACCCAc AUGGGUGA m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-4725-5p ataAGGGTCacccac AGACCCUG m6b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-504-5p ataAGGGTCacccac AGACCCUG m6b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-663b ataaGGGCCACCcac GGUGGCCC m8a Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6736-5p ataagggTCACCCAc CUGGGUGA m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6756-5p ataagggCCACCCac AGGGUGGG m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6766-5p ataagggCCACCCac CGGGUGGG m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6775-3p ataAGGGCCacccac AGGCCCUG m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-6851-3p atAAGGGCCAcccac UGGCCCUU m8a Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-7973 ataaGGGTCACccac UGUGACCC m7b Created HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-938 aTAAGGGCcacccac UGCCCUUA m7b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318

Mutation Mutation ID Sample Name Cancer Type
chr11:g.6394432T>G COSM277398 TCGA-AA-A00N-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3123 ttctggtTTCTCTac CAGAGAAU m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-3925-5p ttctggtTTCTCTac AAGAGAAC m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-3123 ttctggtTTCTCTac CAGAGAAU m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318
hsa-miR-3925-5p ttctggtTTCTCTac AAGAGAAC m6b Disrupted HHRBL_2399_BCBL1-2of3-SCL_5318

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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