SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001007561
Gene Symbol: IRGQ

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr19:g.43592316G>A COSM1612355 BN45T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-575 ggcACTGGCTCgacg GAGCCAGU m8a Disrupted HHKTA_39910_NM_001007561|1731|1770|1.90378940627731|0.298075236505197
hsa-miR-5702 ggcaCTGACTCgacg UGAGUCAG m7b Created HHKTA_39910_NM_001007561|1731|1770|1.90378940627731|0.298075236505197
hsa-miR-4697-3p ggCACTGACtcgacg UGUCAGUG m7b (m6b->m7b) HHKTA_39910_NM_001007561|1731|1770|1.90378940627731|0.298075236505197
hsa-miR-4676-5p ggcACTGGCTCgacg GAGCCAGU m8a Disrupted HHKTA_39910_NM_001007561|1731|1770|1.90378940627731|0.298075236505197

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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