SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007561
Gene Symbol: IRGQ

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.43592824T>C COSM997645 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1470 acgcaggCGGAGGGg GCCCUCCG m7b Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-4485-5p acgCAGGCGGagggg ACCGCCUG m7b Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-6078 acgCAGGCGGagggg CCGCCUGA m7a Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951

Mutation Mutation ID Sample Name Cancer Type
chr19:g.43592819G>A COSM712534 TCGA-66-2789-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-642a-5p ggtggAGAGGGAttg GUCCCUCU m7b Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-4723-3p ggtgGAGAGGGattg CCCUCUCU m7a Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-6769b-3p ggtgGAGAGGGattg CCCUCUCU m7a Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-6887-3p ggtGGAGGGGgattg UCCCCUCC m7b Disrupted HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-6892-3p ggtgGAGAGGGAttg UCCCUCUC m8a Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-2276-5p ggtggAGAGGGattg GCCCUCUG m6b Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951

Mutation Mutation ID Sample Name Cancer Type
chr19:g.43592817G>A COSM1712457 YULAN [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4469 tgGAGGGAGattgga GCUCCCUC m7b (m6b->m7b) HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-7113-3p tggAGGGAGattgga CCUCCCUG m6b Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-6887-3p tGGAGGGGgattgga UCCCCUCC m7b Disrupted HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-6867-3p tggAGGGAGAttgga CUCUCCCU m7b Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951

Mutation Mutation ID Sample Name Cancer Type
chr19:g.43592812G>A COSM4951868 BCM275T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4684-5p ggggatTAGAGAatg CUCUCUAC m6b Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-515-5p ggggaTTGGAGAAtg UUCUCCAA m8a Disrupted HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-519d-5p ggggaTTGGAGaatg CCUCCAAA m6b Disrupted HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-519e-5p ggggaTTGGAGAAtg UUCUCCAA m8a Disrupted HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-520f-5p ggggaTTAGAGaatg CCUCUAAA m6b Created HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951
hsa-miR-5695 ggggaTTGGAGaatg ACUCCAAG m6b Disrupted HHHNE_8875_IRGQ|NM_001007561|exon_CDS|-5.74867677611292|-0.784685558196951

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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