SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007561
Gene Symbol: IRGQ

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.43595121C>T COSM4645994 LS180 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-5p tgggcggTGGAAGCc AGCUUCCA m7b Created HHHNA_12537_IRGQ|NM_001007561|exon_CDS|-5.42667126849327|-1.72009974999933
hsa-miR-718 tgggcGGCGGAAGcc CUUCCGCC m8a Disrupted HHHNA_12537_IRGQ|NM_001007561|exon_CDS|-5.42667126849327|-1.72009974999933

Mutation Mutation ID Sample Name Cancer Type
chr19:g.43595110G>T COSM567016 TCGA-64-5779-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1306-3p aGCCAACGTgctggt ACGUUGGC m8a (m8a->m7a) HHHNA_12537_IRGQ|NM_001007561|exon_CDS|-5.42667126849327|-1.72009974999933
hsa-miR-4715-5p aGCCAACTTgctggt AAGUUGGC m8a (m7a->m8a) HHHNA_12537_IRGQ|NM_001007561|exon_CDS|-5.42667126849327|-1.72009974999933

Mutation Mutation ID Sample Name Cancer Type
chr19:g.43592316G>A COSM1612355 BN45T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4676-5p ggcACTGGCTCgacg GAGCCAGU m8a Disrupted HHHNA_12536_IRGQ|NM_001007561|exon_CDS|-5.02945865911903|0.305334159131334
hsa-miR-4697-3p ggCACTGACtcgacg UGUCAGUG m7b (m6b->m7b) HHHNA_12536_IRGQ|NM_001007561|exon_CDS|-5.02945865911903|0.305334159131334
hsa-miR-5702 ggcaCTGACTCgacg UGAGUCAG m7b Created HHHNA_12536_IRGQ|NM_001007561|exon_CDS|-5.02945865911903|0.305334159131334
hsa-miR-575 ggcACTGGCTCgacg GAGCCAGU m8a Disrupted HHHNA_12536_IRGQ|NM_001007561|exon_CDS|-5.02945865911903|0.305334159131334

Mutation Mutation ID Sample Name Cancer Type
chr19:g.43592165C>T COSM4471665 CSCC-20-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-185-5p gcTCTCTCCttcctg UGGAGAGA m7b (m7b->m6b) HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495
hsa-miR-3185 gctctCTTCTTCctg AGAAGAAG m7b Created HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495
hsa-miR-4306 gcTCTCTCCttcctg UGGAGAGA m7b (m7b->m6b) HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495
hsa-miR-4428 gctcTCTCCTTcctg CAAGGAGA m7b Disrupted HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495
hsa-miR-4476 gctctctCCTTCCTg CAGGAAGG m7b Disrupted HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495
hsa-miR-4533 gctctcTCCTTCCtg UGGAAGGA m7b Disrupted HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495
hsa-miR-4644 gcTCTCTCCttcctg UGGAGAGA m7b (m7b->m6b) HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495
hsa-miR-5197-3p gctCTCTTCTTcctg AAGAAGAG m8a Created HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495
hsa-miR-6876-5p gctctctCCTTCCTg CAGGAAGG m7b Disrupted HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495

Mutation Mutation ID Sample Name Cancer Type
chr19:g.43592161C>T COSM3535288 BCM567T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4476 tctCCTTCCTGtggc CAGGAAGG m8a Disrupted HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495
hsa-miR-4533 tcTCCTTCCtgtggc UGGAAGGA m7b (m7b->m6b) HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495
hsa-miR-6876-5p tctCCTTCCTGtggc CAGGAAGG m8a Disrupted HHHNA_12535_IRGQ|NM_001007561|exon_CDS|-5.30387414768276|-0.368652674532495

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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