SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007269
Gene Symbol: GEMIN7

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.45090572C>T COSN15624323
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-425-3p caatgTTCCCGAgcc AUCGGGAA m7b Disrupted HHHNA_12568_GEMIN7|NM_001007269|exon_utr3|-2.90209884119922|1.27477961287395
hsa-miR-4261 caaTGTTTCCgagcc AGGAAACA m7b Created HHHNA_12568_GEMIN7|NM_001007269|exon_utr3|-2.90209884119922|1.27477961287395
hsa-miR-494-3p caATGTTTCcgagcc UGAAACAU m7b (m6b->m7b) HHHNA_12568_GEMIN7|NM_001007269|exon_utr3|-2.90209884119922|1.27477961287395

Mutation Mutation ID Sample Name Cancer Type
chr19:g.45090338G>A COSM998140 TCGA-BG-A0LX-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1180-5p atgGTGGGTCatcag GGACCCAC m7b Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-640 atggTGGATCATcag AUGAUCCA m8a Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-7114-3p atgGTGGGTCAtcag UGACCCAC m8a Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116

Mutation Mutation ID Sample Name Cancer Type
chr19:g.45090321C>T COSM712368 TCGA-34-5239-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-214-3p tccgcagCCTGCTGg ACAGCAGG m7b Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-3619-5p tccgcagCCTGCTGg UCAGCAGG m7b Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-4494 tccgCAGTCTGctgg CCAGACUG m7b Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-4690-5p tccgcaGCCTGCTgg GAGCAGGC m7b Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-4771 tccgcAGTCTGCTgg AGCAGACU m8a Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-604 tcCGCAGCCTgctgg AGGCUGCG m8a Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-761 tccgcagCCTGCTGg GCAGCAGG m7b Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-922 tccgcagTCTGCTGg GCAGCAGA m7b Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116

Mutation Mutation ID Sample Name Cancer Type
chr19:g.45090316C>T COSM311432 S00827 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2467-3p ttaCCTCTGCagcct AGCAGAGG m7b Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-3158-5p ttaccTCTGCAGcct CCUGCAGA m7b Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-3678-3p ttacCTCTGCAGcct CUGCAGAG m8a Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-4257 ttACCTCTGcagcct CCAGAGGU m7b (m6b->m7b) HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-604 ttacctcCGCAGCCt AGGCUGCG m7b Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-658 ttaCCTCCGCagcct GGCGGAGG m7b Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116

Mutation Mutation ID Sample Name Cancer Type
chr19:g.45090301C>T COSM1525686 TCGA-69-7980-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-150-5p cgccctTTGGGAGcg UCUCCCAA m7b Created HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-186-3p cgccCTTTGGGagcg GCCCAAAG m7b Created HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-150-5p cgccctTTGGGAGcg UCUCCCAA m7b Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-186-3p cgccCTTTGGGagcg GCCCAAAG m7b Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116

Mutation Mutation ID Sample Name Cancer Type
chr19:g.45090297C>T COSM3892866 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3141 gagCCGCCCTtcggg GAGGGCGG m7b Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-4671-5p gagccgcTCTTCGGg ACCGAAGA m7b Created HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-3141 gagCCGCCCTtcggg GAGGGCGG m7b Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116
hsa-miR-4671-5p gagccgcTCTTCGGg ACCGAAGA m7b Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116

Mutation Mutation ID Sample Name Cancer Type
chr19:g.45090295G>A COSM1208104 587278 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3141 acgagCCGCCCTtcg GAGGGCGG m7b Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-3141 acgagCCGCCCTtcg GAGGGCGG m7b Disrupted HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116

Mutation Mutation ID Sample Name Cancer Type
chr19:g.45090290G>A COSM3535861 TCGA-DA-A3F8-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-550b-2-5p cgGGCACAagccgcc AUGUGCCU m6b Created HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-550b-2-5p cgGGCACAagccgcc AUGUGCCU m6b Created HHHNA_12567_GEMIN7|NM_001007269|exon_CDS|-2.51451188196143|-0.161209214723116

Mutation Mutation ID Sample Name Cancer Type
chr19:g.45090272C>T COSM566863 TCGA-67-3771-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1343-3p ctggaatCCCAGGAg CUCCUGGG m7b Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-3690 ctggaatTCCAGGag ACCUGGAC m6b Created HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-4254 ctggaatTCCAGGag GCCUGGAG m6b Created HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-4320 ctgGAATCCCaggag GGGAUUCU m7a Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-5089-5p ctggAATCCCAggag GUGGGAUU m7b Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-6128 ctggaATTCCAGgag ACUGGAAU m7b Created HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-619-5p ctggaATCCCAGgag GCUGGGAU m7b Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-6506-5p ctggaATCCCAGgag ACUGGGAU m7b Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-6742-3p ctggaatCCCAGGag ACCUGGGU m6b Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-6783-3p ctggaatCCCAGGAg UUCCUGGG m7b Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-6852-5p ctggaatCCCAGGag CCCUGGGG m6b Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-875-3p ctggaaTTCCAGGag CCUGGAAA m7a Created HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406
hsa-miR-939-3p ctggaatCCCAGGag CCCUGGGC m6b Disrupted HHHNA_12566_GEMIN7|NM_001007269|exon_CDS|-2.91696035966845|0.0223958185628406

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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