SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007227
Gene Symbol: SPOP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619099G>A COSM980811 TCGA-BS-A0UA-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1267 agTCAACAGGcatat CCUGUUGA m8a Created HPSD3_4521_G5980.1_47696459
hsa-miR-4633-5p agtcaacAGGCATAt AUAUGCCU m7b Created HPSD3_4521_G5980.1_47696459
hsa-miR-6514-3p agtcaACAGGCAtat CUGCCUGU m7b Created HPSD3_4521_G5980.1_47696459
hsa-miR-6811-3p agtcaACAGGCatat AGCCUGUG m6b Created HPSD3_4521_G5980.1_47696459
hsa-miR-532-5p agtcaacAGGCATat CAUGCCUU m6b Created HPSD3_4521_G5980.1_47696459

Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619094GCAT>T COSM241745 WA10 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3144-3p tcaacGGTATAggtt AUAUACCU m6b Created HPSD3_4521_G5980.1_47696459
hsa-miR-4633-5p tcaacgGGCATATaggtt AUAUGCCU m7a Disrupted HPSD3_4521_G5980.1_47696459

Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619088T>G COSM95273 111878 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-652-5p ataTAGGGTTGtgca CAACCCUA m8a Created HPSD3_4521_G5980.1_47696459

Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619086T>A COSM242643 P07-684 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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