SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007227
Gene Symbol: SPOP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619354G>A COSM980815 TCGA-D1-A168-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-452-3p gttAGATGAagaaag CUCAUCUG m6b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-6875-3p gttagatGAAGAAag AUUCUUCC m6b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140

Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619346C>G COSM1177847 T56 [bone][scapula][malignant_fibrous_histiocytoma-pleomorphic_sarcoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3124-3p aagaaAGGAAAGatt ACUUUCCU m7b Created HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-3160-5p aAGAAAGCaaagatt GGCUUUCU m7b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-6885-3p aagaAAGCAAAGatt CUUUGCUU m8a Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140

Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619327T>A COSM242640 STID0000002525_A [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-5p gtCACTTTacctgtt AAAAGUGC m6b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-17-5p gtCACTTTacctgtt CAAAGUGC m6b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-20b-5p gtCACTTTacctgtt CAAAGUGC m6b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-519d-3p gtCACTTTacctgtt CAAAGUGC m6b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-526b-3p gtCACTTTacctgtt GAAAGUGC m6b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-548ah-5p gTCACTTTacctgtt AAAAGUGA m7b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-93-5p gtCACTTTacctgtt CAAAGUGC m6b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140

Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619326A>G COSM248681 0077_CRUK_PC_0077_T1_DNA [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4742-5p tcactTTGCCTGtta UCAGGCAA m7b Created HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-552-3p tcactttACCTGTTa AACAGGUG m7a Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140

Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619326A>C COSM241746 TCGA-EJ-5505-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3153 tcaCTTTCCCtgtta GGGGAAAG m7b Created HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-552-3p tcactttACCTGTTa AACAGGUG m7a Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-5584-5p tcacTTTCCCTGtta CAGGGAAA m8a Created HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-6733-5p tcaCTTTCCCtgtta UGGGAAAG m7b Created HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-6739-5p tcaCTTTCCCtgtta UGGGAAAG m7b Created HHRBL_6482_BCBL1-2of3-SCL_12140
Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619313C>T COSM1750122 B65-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619306C>G COSM1177662 T80 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4520-2-3p cagcTGTCCAAAgag UUUGGACA m8a Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-4520-3p cagCTGTCCAAagag UUGGACAG m8a Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-4529-3p cagctGTCCAAagag AUUGGACU m6b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-507 cagctGTGCAAAgag UUUUGCAC m7b Created HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-557 cagctGTGCAAAgag GUUUGCAC m7b Created HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-7850-5p cagctGTCCAAAgag GUUUGGAC m7b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140

Mutation Mutation ID Sample Name Cancer Type
chr17:g.49619305C>G COSM3370781 TCGA-EM-A3FR-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130b-5p agctgtcGAAAGAGt ACUCUUUC m7b Created HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-196b-3p aGCTGTCGAaagagt UCGACAGC m8a (m7a->m8a) HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-4520-2-3p agcTGTCCAAAgagt UUUGGACA m8a Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-4520-3p agCTGTCCAAagagt UUGGACAG m8a Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-4529-3p agctGTCCAAagagt AUUGGACU m6b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140
hsa-miR-7850-5p agctGTCCAAAgagt GUUUGGAC m7b Disrupted HHRBL_6482_BCBL1-2of3-SCL_12140

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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