SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007101
Gene Symbol: ZNF484

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.92848140C>T COSM1196821 H1993 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4712-3p ttgaatTCTCATaca AAUGAGAG m6b Disrupted HPSD3_10399_G14106.1_95610428
hsa-miR-580-3p ttgaATTCTCAtaca UUGAGAAU m7b Disrupted HPSD3_10399_G14106.1_95610428

Mutation Mutation ID Sample Name Cancer Type
chr9:g.92848135A>G COSM3930189 TCGA-DU-6405-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-675-3p ttctCATACAGaagt CUGUAUGC m7a Disrupted HPSD3_10399_G14106.1_95610428
hsa-miR-4742-3p ttctcATACAGAagt UCUGUAUU m7a Disrupted HPSD3_10399_G14106.1_95610428
hsa-miR-20a-3p ttctcATGCAGaagt ACUGCAUU m6b Created HPSD3_10399_G14106.1_95610428
hsa-miR-3182 ttctcatACAGAAGt GCUUCUGU m7b Disrupted HPSD3_10399_G14106.1_95610428
hsa-miR-3686 ttctcaTACAGAagt AUCUGUAA m6b Disrupted HPSD3_10399_G14106.1_95610428
hsa-miR-544a ttctcaTGCAGAAgt AUUCUGCA m7b Created HPSD3_10399_G14106.1_95610428
hsa-miR-6076 ttcTCATGCagaagt AGCAUGAC m6b Created HPSD3_10399_G14106.1_95610428

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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