SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007094
Gene Symbol: ZNF37A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.38118775C>T COSM1702261 YUMER [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3192-3p tgtacATCAGAGaat CUCUGAUC m7a Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-3191-5p tgtacatCAGAGAat CUCUCUGG m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-3171 tgTACATCagagaat AGAUGUAU m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-301b-5p tgtacaTCAGAGaat GCUCUGAC m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-301a-5p tgtacaTCAGAGaat GCUCUGAC m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-146a-3p tgtacaTCAGAGaat CCUCUGAA m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-520f-5p tgtacaTTAGAGaat CCUCUAAA m6b Created HPTA3_2493_G3697.1_38407696
hsa-miR-4684-5p tgtacatTAGAGAat CUCUCUAC m6b Created HPTA3_2493_G3697.1_38407696
hsa-miR-520f-5p tgtacaTTAGAGaat CCUCUAAA m6b Created HPTA3_2493_G3697.1_38407696
hsa-miR-4653-5p tgtacaTCAGAGAat UCUCUGAG m7a Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-4684-5p tgtacatTAGAGAat CUCUCUAC m6b Created HPTA3_2493_G3697.1_38407696
hsa-miR-4653-5p tgtacaTCAGAGAat UCUCUGAG m7a Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-4502 tgtaCATCAGagaat GCUGAUGA m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-3921 tgtacaTCAGAGAat UCUCUGAG m7a Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-4502 tgtaCATCAGagaat GCUGAUGA m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-146a-3p tgtacaTCAGAGaat CCUCUGAA m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-301a-5p tgtacaTCAGAGaat GCUCUGAC m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-301b-5p tgtacaTCAGAGaat GCUCUGAC m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-3171 tgTACATCagagaat AGAUGUAU m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-3191-5p tgtacatCAGAGAat CUCUCUGG m6b Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-3192-3p tgtacATCAGAGaat CUCUGAUC m7a Disrupted HPTA3_2493_G3697.1_38407696
hsa-miR-3921 tgtacaTCAGAGAat UCUCUGAG m7a Disrupted HPTA3_2493_G3697.1_38407696

Mutation Mutation ID Sample Name Cancer Type
chr10:g.38118681C>G COSM3724284 388 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4328 cAAAACTGattgcac CCAGUUUU m7b Created HPTA3_2492_G3696.1_38407620
hsa-miR-106a-3p caaaactCATTGCAc CUGCAAUG m7b Disrupted HPTA3_2492_G3696.1_38407620
hsa-miR-106a-3p caaaactCATTGCAc CUGCAAUG m7b Disrupted HPTA3_2492_G3696.1_38407620
hsa-miR-4328 cAAAACTGattgcac CCAGUUUU m7b Created HPTA3_2492_G3696.1_38407620

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser