SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007088
Gene Symbol: ZNF182

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.47977066A>G COSM4953390 CHC801T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-5p aacccACACTGGaga CCCAGUGU m7b Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-199b-5p aacccACACTGGaga CCCAGUGU m7b Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-3925-3p aacccacACTGGAGa ACUCCAGU m7b Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-4302 aaccCACACTGGaga CCAGUGUG m8a Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-4738-5p aacccaCGCTGGaga ACCAGCGC m6b Created HPRO6_80892_G96931.1_47836474
hsa-miR-6759-5p aACCCACActggaga UUGUGGGU m7b Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-6793-5p AACCCACActggaga UGUGGGUU m8a Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-6853-5p aaCCCACGCTggaga AGCGUGGG m8a Created HPRO6_80892_G96931.1_47836474
hsa-miR-766-3p aacccacGCTGGAGa ACUCCAGC m7b Created HPRO6_80892_G96931.1_47836474
hsa-miR-199a-5p aacccACACTGGaga CCCAGUGU m7b Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-199b-5p aacccACACTGGaga CCCAGUGU m7b Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-3925-3p aacccacACTGGAGa ACUCCAGU m7b Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-4302 aaccCACACTGGaga CCAGUGUG m8a Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-4738-5p aacccaCGCTGGaga ACCAGCGC m6b Created HPRO6_80892_G96931.1_47836474
hsa-miR-6759-5p aACCCACActggaga UUGUGGGU m7b Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-6793-5p AACCCACActggaga UGUGGGUU m8a Disrupted HPRO6_80892_G96931.1_47836474
hsa-miR-6853-5p aaCCCACGCTggaga AGCGUGGG m8a Created HPRO6_80892_G96931.1_47836474
hsa-miR-766-3p aacccacGCTGGAGa ACUCCAGC m7b Created HPRO6_80892_G96931.1_47836474

Mutation Mutation ID Sample Name Cancer Type
chrX:g.47976756A>G COSM77093 TCGA-CM-5348-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4464 aagtCAAACCTTggt AAGGUUUG m8a Disrupted HPRO6_80891_G96929.1_47836154
hsa-miR-4748 aagtCAAACCTtggt GAGGUUUG m7b Disrupted HPRO6_80891_G96929.1_47836154
hsa-miR-4464 aagtCAAACCTTggt AAGGUUUG m8a Disrupted HPRO6_80891_G96929.1_47836154
hsa-miR-4748 aagtCAAACCTtggt GAGGUUUG m7b Disrupted HPRO6_80891_G96929.1_47836154

Mutation Mutation ID Sample Name Cancer Type
chrX:g.47976656G>A COSM4904578 TCGA-BF-A3DL-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-146a-3p tgcaTCAGAGaggtc CCUCUGAA m6b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-301a-5p tgcaTCAGAGaggtc GCUCUGAC m6b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-301b-5p tgcaTCAGAGaggtc GCUCUGAC m6b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-3183 tgcatcAGAGAGGtc GCCUCUCU m7b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-3192-3p tgcATCAGAGaggtc CUCUGAUC m7a Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-4502 tgCATCAGagaggtc GCUGAUGA m6b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-4723-3p tgcatcAGAGAGGtc CCCUCUCU m7b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-6769b-3p tgcatcAGAGAGGtc CCCUCUCU m7b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-6800-3p tgcatcaGAGAGGTc CACCUCUC m7b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-6817-3p tgcatCAGAGAGgtc UCUCUCUG m7b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-146a-3p tgcaTCAGAGaggtc CCUCUGAA m6b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-301a-5p tgcaTCAGAGaggtc GCUCUGAC m6b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-301b-5p tgcaTCAGAGaggtc GCUCUGAC m6b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-3183 tgcatcAGAGAGGtc GCCUCUCU m7b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-3192-3p tgcATCAGAGaggtc CUCUGAUC m7a Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-4502 tgCATCAGagaggtc GCUGAUGA m6b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-4723-3p tgcatcAGAGAGGtc CCCUCUCU m7b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-6769b-3p tgcatcAGAGAGGtc CCCUCUCU m7b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-6800-3p tgcatcaGAGAGGTc CACCUCUC m7b Disrupted HPRO6_80890_G96928.1_47836066
hsa-miR-6817-3p tgcatCAGAGAGgtc UCUCUCUG m7b Disrupted HPRO6_80890_G96928.1_47836066

Mutation Mutation ID Sample Name Cancer Type
chrX:g.47976633C>T COSM3561877 TCGA-EE-A29D-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4464 gagAAACCTTacgag AAGGUUUG m7a Disrupted HPRO6_80889_G96927.1_47836029
hsa-miR-548at-5p gagaAACTTTacgag AAAAGUUA m6b Created HPRO6_80889_G96927.1_47836029
hsa-miR-561-3p gagAAACTTTacgag CAAAGUUU m7b Created HPRO6_80889_G96927.1_47836029
hsa-miR-4464 gagAAACCTTacgag AAGGUUUG m7a Disrupted HPRO6_80889_G96927.1_47836029
hsa-miR-548at-5p gagaAACTTTacgag AAAAGUUA m6b Created HPRO6_80889_G96927.1_47836029
hsa-miR-561-3p gagAAACTTTacgag CAAAGUUU m7b Created HPRO6_80889_G96927.1_47836029

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser