SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007073
Gene Symbol: RPL32
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.12836208G>A COSM3774500 TCGA-DK-A3X1-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4638-5p gtGCCGAGatcgctc ACUCGGCU m6b Disrupted HHRBL_9726_BCBL1-2of3-SCL_754

Mutation Mutation ID Sample Name Cancer Type
chr3:g.12836205C>T COSM1240099 ESO-859 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3908 ccgagATTGCTCaca GAGCAAUG m7a Created HHRBL_9726_BCBL1-2of3-SCL_754
hsa-miR-5708 ccgagaTCGCTCAca AUGAGCGA m7b Disrupted HHRBL_9726_BCBL1-2of3-SCL_754

Mutation Mutation ID Sample Name Cancer Type
chr3:g.12836179G>A COSM4722617 T469 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273g-5p aagAACCACaaagcc GGUGGUUG m6b Created HHRBL_9726_BCBL1-2of3-SCL_754
hsa-miR-1251-3p aagaaccGCAAAGCc CGCUUUGC m7b Disrupted HHRBL_9726_BCBL1-2of3-SCL_754
hsa-miR-203a-5p aaGAACCACaaagcc AGUGGUUC m7b (m6b->m7b) HHRBL_9726_BCBL1-2of3-SCL_754

Mutation Mutation ID Sample Name Cancer Type
chr3:g.12836169C>T COSM289763 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3692-3p aagccatTGTGGAAa GUUCCACA m7b Created HHRBL_9726_BCBL1-2of3-SCL_754

Mutation Mutation ID Sample Name Cancer Type
chr3:g.12836114C>T COSM4318780 LIM1215 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4418 caggctgTGCAGTGa CACUGCAG m7a Created HHRBL_9726_BCBL1-2of3-SCL_754
hsa-miR-6807-3p caggctgTGCAGTGa CACUGCAU m7a Created HHRBL_9726_BCBL1-2of3-SCL_754

Mutation Mutation ID Sample Name Cancer Type
chr3:g.12836078G>A COSN5271065 SNUH_G26_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-424-3p tgtgcACGTTTTctg CAAAACGU m7b Disrupted HHRBL_9726_BCBL1-2of3-SCL_754

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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