SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
Transcript ID: | NM_001007026 |
---|---|
Gene Symbol: | ATN1 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6940941C>T | COSM695263 | TCGA-60-2709-01 | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4713-3p | cccGGATCCCctacc | UGGGAUCC | m7b | Disrupted | HPTA1_2594_G3622.1_7050101 |
hsa-miR-5584-5p | cccggaTTCCCTacc | CAGGGAAA | m6b | Created | HPTA1_2594_G3622.1_7050101 |
hsa-miR-6750-5p | cccggaTTCCCTacc | CAGGGAAC | m6b | Created | HPTA1_2594_G3622.1_7050101 |
hsa-miR-6822-5p | cccggaTTCCCTacc | CAGGGAAC | m6b | Created | HPTA1_2594_G3622.1_7050101 |
hsa-miR-6824-5p | cccggaTCCCCTACc | GUAGGGGA | m8a | Disrupted | HPTA1_2594_G3622.1_7050101 |
hsa-miR-9500 | cccggaTTCCCTacc | AAGGGAAG | m6b | Created | HPTA1_2594_G3622.1_7050101 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6940936C>A | COSM943090 | TCGA-D1-A163-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4490 | ccTTACCAGgatccc | UCUGGUAA | m7b | (m6b->m7b) | HPTA1_2594_G3622.1_7050101 |
hsa-miR-555 | cCTTACCCggatccc | AGGGUAAG | m7b | Disrupted | HPTA1_2594_G3622.1_7050101 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6940925C>T | COSM2100264 | HT115 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4725-5p | tCAGGGTCTcacctt | AGACCCUG | m8a | (m8a->m7a) | HPTA1_2594_G3622.1_7050101 |
hsa-miR-504-5p | tCAGGGTCTcacctt | AGACCCUG | m8a | (m8a->m7a) | HPTA1_2594_G3622.1_7050101 |
hsa-miR-6732-3p | tCAGGGTTtcacctt | UAACCCUG | m7b | Created | HPTA1_2594_G3622.1_7050101 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6937112C>T | COSM127382 | HN_62298 | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3978 | ccCTTTCCACggtca | GUGGAAAG | m8a | Disrupted | HPTA1_2593_G3621.1_7046261 |
hsa-miR-5681a | CCCTTTCTacggtca | AGAAAGGG | m8a | Created | HPTA1_2593_G3621.1_7046261 |
hsa-miR-6730-5p | cCCTTTCTacggtca | AGAAAGGU | m7a | Created | HPTA1_2593_G3621.1_7046261 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6937099C>T | COSM243105 | PR-00-1165 | [prostate][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4662a-5p | acctctTTGGCTAcc | UUAGCCAA | m7b | Created | HPTA1_2593_G3621.1_7046261 |
hsa-miR-4671-5p | accTCTTCGGctacc | ACCGAAGA | m7b | Disrupted | HPTA1_2593_G3621.1_7046261 |
hsa-miR-583 | aCCTCTTTGgctacc | CAAAGAGG | m8a | (m7a->m8a) | HPTA1_2593_G3621.1_7046261 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.6937091C>A | COSM4147430 | PTC-7C | [thyroid][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-377-5p | cggtcaCAACCTCTt | AGAGGUUG | m8a | Created | HPTA1_2593_G3621.1_7046261 |
hsa-miR-6086 | cggtcaCAACCTCtt | GGAGGUUG | m7b | Created | HPTA1_2593_G3621.1_7046261 |
hsa-miR-6134 | cggtcaCCACCTCtt | UGAGGUGG | m7b | Disrupted | HPTA1_2593_G3621.1_7046261 |
hsa-miR-6808-3p | cGGTCACAacctctt | GUGUGACC | m7b | Created | HPTA1_2593_G3621.1_7046261 |
hsa-miR-758-3p | cgGTCACAAcctctt | UUUGUGAC | m7b | (m6b->m7b) | HPTA1_2593_G3621.1_7046261 |
hsa-miR-7973 | cGGTCACAacctctt | UGUGACCC | m7a | Created | HPTA1_2593_G3621.1_7046261 |