SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007026
Gene Symbol: ATN1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.6936220C>A COSM1676689 KM12 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15a-3p tctccccATGGCCTg CAGGCCAU m7b Created HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-3150a-3p tCTCCCCAtggcctg CUGGGGAG m7b Created HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-4716-3p tcTCCCCCTggcctg AAGGGGGA m7b (m7b->m6b) HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-6763-5p tCTCCCCAtggcctg CUGGGGAG m7b Created HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-6794-5p tcTCCCCCTGgcctg CAGGGGGA m8a Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-6798-5p tctCCCCCTGGcctg CCAGGGGG m8a Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-7111-5p tCTCCCCCtggcctg UGGGGGAG m7b Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524

Mutation Mutation ID Sample Name Cancer Type
chr12:g.6936215T>TC COSM1363990 TCGA-D5-6928-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3175 cagccTCTCCCCctg CGGGGAGA m7b Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-4716-3p cagcctcTCCCCCTg AAGGGGGA m7b Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-4723-5p cagcctCTCCCCCtg UGGGGGAG m7b Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-485-5p CAGCCTCTccccctg AGAGGCUG m8a Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-5698 cagcctCTCCCCCtg UGGGGGAG m7b Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-6731-5p cagcCTCTCCCcctg UGGGAGAG m7b Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-6794-5p cagcctcTCCCCCTg CAGGGGGA m7b Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-6795-5p cagcctcTCCCCCCtg UGGGGGGA m7b Created HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-6870-5p cagcctCTCCCCCtg UGGGGGAG m7b Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-6884-5p CAGCCTCTccccctg AGAGGCUG m8a Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-6887-5p cagcctcTCCCCCCtg UGGGGGGA m7b Created HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-7111-5p cagcctCTCCCCCtg UGGGGGAG m7b Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524
hsa-miR-8085 cagcCTCTCCCcctg UGGGAGAG m7b Disrupted HHRBL_3212_BCBL1-2of3-SCL_10524

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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