SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001007026
Gene Symbol: ATN1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.6941008C>T COSM3812919 TCGA-JL-A3YW-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4504 agttctTTGTCACca UGUGACAA m7b Created HHKTA_41850_NM_001007026|3556|3595|1.8172535241738|1.77196681609283
hsa-miR-4511 AGTTCTTCgtcacca GAAGAACU m8a Disrupted HHKTA_41850_NM_001007026|3556|3595|1.8172535241738|1.77196681609283

Mutation Mutation ID Sample Name Cancer Type
chr12:g.6940983C>T COSM3968416 TCGA-HT-7854-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255a ttcCTCATCCTctgc AGGAUGAG m8a Created HHKTA_41850_NM_001007026|3556|3595|1.8172535241738|1.77196681609283
hsa-miR-1255b-5p ttcCTCATCCtctgc CGGAUGAG m7b Created HHKTA_41850_NM_001007026|3556|3595|1.8172535241738|1.77196681609283
hsa-miR-3605-5p ttcctCATCCTCtgc UGAGGAUG m7b Created HHKTA_41850_NM_001007026|3556|3595|1.8172535241738|1.77196681609283
hsa-miR-4710 ttCCTCACCCtctgc GGGUGAGG m8a Disrupted HHKTA_41850_NM_001007026|3556|3595|1.8172535241738|1.77196681609283
hsa-miR-6804-5p ttcctCACCCTCtgc UGAGGGUG m7b Disrupted HHKTA_41850_NM_001007026|3556|3595|1.8172535241738|1.77196681609283
hsa-miR-6847-5p ttcctcaTCCTCTGc ACAGAGGA m7b Created HHKTA_41850_NM_001007026|3556|3595|1.8172535241738|1.77196681609283

Mutation Mutation ID Sample Name Cancer Type
chr12:g.6936549A>G COSM2100209 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4663 caagtatGCTCAGCc AGCUGAGC m7b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-8077 caagtatACTCAGCc GGCUGAGU m7b Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283

Mutation Mutation ID Sample Name Cancer Type
chr12:g.6936539C>T COSM4664119 T3021 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273h-5p atcagCCTCCCAagt CUGGGAGG m7b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-1275 atcagcCCCCCAagt GUGGGGGA m6b Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-149-3p atcagCCTCCCaagt AGGGAGGG m6b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-185-3p atCAGCCCCccaagt AGGGGCUG m7b (m7b->m6b) HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-30b-3p atcagCCTCCCAagt CUGGGAGG m7b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-30c-1-3p atcagcCTCCCAagt CUGGGAGA m6b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-30c-2-3p atcagcCTCCCAagt CUGGGAGA m6b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-328-5p atcaGCCCCCCaagt GGGGGGGC m7b Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-3689a-3p atcagCCTCCCAagt CUGGGAGG m7b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-3689b-3p atcagCCTCCCAagt CUGGGAGG m7b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-3689c atcagCCTCCCAagt CUGGGAGG m7b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-3929 aTCAGCCTCccaagt GAGGCUGA m8a (m7a->m8a) HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-4419b aTCAGCCTCccaagt GAGGCUGA m8a (m7a->m8a) HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-4478 aTCAGCCTCccaagt GAGGCUGA m8a (m7a->m8a) HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-4656 aTCAGCCCcccaagt UGGGCUGA m7b Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-4665-5p atcagcCCCCCAagt CUGGGGGA m6b Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-4728-5p atcagCCTCCCAagt UGGGAGGG m7a Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-485-5p atCAGCCTCccaagt AGAGGCUG m7b (m6b->m7b) HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6779-5p atcagCCTCCCAagt CUGGGAGG m7b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6780a-5p atcagCCTCCCAAgt UUGGGAGG m8a Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6785-5p atcagCCTCCCAagt UGGGAGGG m7a Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6788-5p atcagcCTCCCAagt CUGGGAGA m6b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6795-5p atcagCCCCCCAagt UGGGGGGA m7a Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6799-5p atcagCCTCCCaagt GGGGAGGU m6b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6803-5p atcagcCCCCCAagt CUGGGGGU m6b Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6846-5p atcAGCCCCCcaagt UGGGGGCU m7b Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6848-5p atcAGCCCCCcaagt UGGGGGCU m7b Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6883-5p atcagCCTCCCaagt AGGGAGGG m6b Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6884-5p atCAGCCTCccaagt AGAGGCUG m7b (m6b->m7b) HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6885-5p atcaGCCCCCCaagt AGGGGGGC m7b Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-6887-5p atcagCCCCCCAagt UGGGGGGA m7a Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-7106-5p atcagCCTCCCAagt UGGGAGGA m7a Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-7109-5p atcagCCCCCCAagt CUGGGGGG m7b Disrupted HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283
hsa-miR-887-5p atcagcCTCCCAAGt CUUGGGAG m8a Created HHKTA_27709_NM_001007026|1507|1546|2.68261234520894|1.77196681609283

Mutation Mutation ID Sample Name Cancer Type
chr12:g.6935877C>T COSM4502352 CSCC-29-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p cacatctTGAATGTt AACAUUCA m7b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-181b-5p cacatctTGAATGTt AACAUUCA m7b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-181c-5p cacatctTGAATGTt AACAUUCA m7b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-181d-5p cacatctTGAATGTt AACAUUCA m7b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-4262 cacatctTGAATGTt GACAUUCA m7b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283

Mutation Mutation ID Sample Name Cancer Type
chr12:g.6935872C>T COSM431779 TCGA-AR-A0TR-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1275 cCCCCCACatctcga GUGGGGGA m7a Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-299-3p cccCCCACATctcga UAUGUGGG m7b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-3151-5p ccCCCCACatctcga GGUGGGGC m6b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-4447 cCCCCCACatctcga GGUGGGGG m7b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-4472 cCCCCCACatctcga GGUGGGGG m7b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-491-5p ccCCCCACatctcga AGUGGGGA m6b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-576-3p cccccCACATCTcga AAGAUGUG m7b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-6742-5p ccCCCCACatctcga AGUGGGGU m6b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-6796-5p ccCCCCACAtctcga UUGUGGGG m7b (m7b->m6b) HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-6890-5p ccCCCCATatctcga CAUGGGGU m6b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283

Mutation Mutation ID Sample Name Cancer Type
chr12:g.6935862G>C COSM3968413 TCGA-DU-A5TR-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-185-3p tcccatgCAGCCCCc AGGGGCUG m7b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-4283 tcccatgGAGCCCCc UGGGGCUC m7b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-5011-3p tcCCATGCAgccccc GUGCAUGG m7b (m6b->m7b) HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-6829-5p tcccatGCAGCCCcc UGGGCUGC m7b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283

Mutation Mutation ID Sample Name Cancer Type
chr12:g.6935856C>T COSM1705007 YURIF [NS][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-490-5p tcatgctTCCATGGa CCAUGGAU m7a Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-6079 tcatGCTTCCAtgga UUGGAAGC m7b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-6090 tcatGCTCCCatgga GGGGAGCG m6b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-671-5p tcatGCTTCCatgga AGGAAGCC m6b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-6726-5p tcatGCTCCCatgga CGGGAGCU m6b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-6828-5p tcaTGCTTCCatgga AGGAAGCA m7b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-6871-5p tcatgCTCCCATGga CAUGGGAG m8a Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-920 tcatGCTCCCatgga GGGGAGCU m6b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283

Mutation Mutation ID Sample Name Cancer Type
chr12:g.6935845G>A COSM1476882 TCGA-BH-A1F6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-144-5p cccactgGATATCat GGAUAUCA m6b Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-3145-3p cccactgAATATCat AGAUAUUU m6b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-4276 ccCACTGAatatcat CUCAGUGA m6b Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-5195-3p cccACTGGATatcat AUCCAGUU m7a Disrupted HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283
hsa-miR-6074 cccacTGAATATCat GAUAUUCA m8a Created HHKTA_48522_NM_001007026|809|848|1.42784205470798|1.77196681609283

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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