| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_001007026 |
|---|---|
| Gene Symbol: | ATN1 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.6937075C>T | COSM943085 | 1N65-VS-1T65 | [oesophagus][NS][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-194-3p | ttCCCACTGGtgcct | CCAGUGGG | m8a | Created | HHHNE_1461_ATN1|NM_001007026|exon_CDS|-5.40459063010145|-1.42164876968501 |
| hsa-miR-593-5p | ttcccacTGGTGCCt | AGGCACCA | m7b | Created | HHHNE_1461_ATN1|NM_001007026|exon_CDS|-5.40459063010145|-1.42164876968501 |
| hsa-miR-6786-5p | ttCCCACCGgtgcct | GCGGUGGG | m7b | (m7b->m6b) | HHHNE_1461_ATN1|NM_001007026|exon_CDS|-5.40459063010145|-1.42164876968501 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.6936371GC>G | COSM1180786 | 587350 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-1237-5p | ctccagCGCCCCCcat | CGGGGGCG | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-328-5p | ctccagcGCCCCCCat | GGGGGGGC | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-4488 | ctccagCGCCCCCcat | AGGGGGCG | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-4697-5p | ctccagCGCCCCCcat | AGGGGGCG | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-6846-5p | ctccagcGCCCCCAt | UGGGGGCU | m7a | Created | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-6848-5p | ctccagcGCCCCCAt | UGGGGGCU | m7a | Created | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-6885-5p | ctccagcGCCCCCCat | AGGGGGGC | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.6936370C>T | COSM1363991 | TCGA-AZ-6601-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-1237-5p | gctccagCGCCCCCc | CGGGGGCG | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-4488 | gctccagCGCCCCCc | AGGGGGCG | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-4697-5p | gctccagCGCCCCCc | AGGGGGCG | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.6936368A>G | COSM4422675 | C0069T | [kidney][NS][other][neoplasm] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-1203 | ctGCTCCGGcgcccc | CCCGGAGC | m7b | (m6b->m7b) | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-3135b | ctgCTCCAGCgcccc | GGCUGGAG | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-3195 | ctgctCCGGCGCccc | CGCGCCGG | m7b | Created | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.6936321C>G | COSM695268 | TCGA-18-3406-01 | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-4259 | CCCAACTGtggctcc | CAGUUGGG | m8a | Created | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-449b-3p | cccaacTGTGGCTcc | CAGCCACA | m7b | Created | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-571 | cCCAACTCtggctcc | UGAGUUGG | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr12:g.6936318A>C | COSM943083 | TCGA-AP-A051-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3147 | ggGCCCAACtctggc | GGUUGGGC | m7b | (m7b->m6b) | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-4257 | gggcccACCTCTGGc | CCAGAGGU | m8a | Created | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-4259 | gggCCCAACTctggc | CAGUUGGG | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-541-3p | ggGCCCACCtctggc | UGGUGGGC | m7b | (m6b->m7b) | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-571 | gggcCCAACTCtggc | UGAGUUGG | m7b | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-6134 | gggcCCACCTCtggc | UGAGGUGG | m7b | Created | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-654-5p | ggGCCCACCtctggc | UGGUGGGC | m7b | (m6b->m7b) | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |
| hsa-miR-6773-5p | GGGCCCAActctggc | UUGGGCCC | m8a | Disrupted | HHHNE_1459_ATN1|NM_001007026|exon_CDS|-4.48132618701729|-0.165412055808285 |