SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001006610
Gene Symbol: SIAH1
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr16:g.48362208C>T COSM1265576 ESO-837 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr16:g.48362203C>T COSM971033 TCGA-A5-A0VQ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4707-5p aacttGCCGGGGCcc GCCCCGGC m8a Disrupted HPTA3_7509_G11843.1_48396107
hsa-miR-874-5p aacttgcTGGGGCCc CGGCCCCA m7b Created HPTA3_7509_G11843.1_48396107
hsa-miR-4707-5p aacttGCCGGGGCcc GCCCCGGC m8a Disrupted HPTA3_7509_G11843.1_48396107
hsa-miR-874-5p aacttgcTGGGGCCc CGGCCCCA m7b Created HPTA3_7509_G11843.1_48396107

Mutation Mutation ID Sample Name Cancer Type
chr16:g.48362198C>T COSM2833187 LS180 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-5p gccGGGGCCCTttgg AGGGCCCC m8a Disrupted HPTA3_7509_G11843.1_48396107
hsa-miR-4707-5p GCCGGGGCcctttgg GCCCCGGC m8a Disrupted HPTA3_7509_G11843.1_48396107
hsa-miR-6816-3p gccggGGTCCTTtgg GAAGGACC m7b Created HPTA3_7509_G11843.1_48396107
hsa-miR-7160-3p gccgGGGCCCTttgg CAGGGCCC m7b Disrupted HPTA3_7509_G11843.1_48396107
hsa-miR-296-5p gccGGGGCCCTttgg AGGGCCCC m8a Disrupted HPTA3_7509_G11843.1_48396107
hsa-miR-4707-5p GCCGGGGCcctttgg GCCCCGGC m8a Disrupted HPTA3_7509_G11843.1_48396107
hsa-miR-6816-3p gccggGGTCCTTtgg GAAGGACC m7b Created HPTA3_7509_G11843.1_48396107
hsa-miR-7160-3p gccgGGGCCCTttgg CAGGGCCC m7b Disrupted HPTA3_7509_G11843.1_48396107

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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