SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001006610
Gene Symbol: SIAH1
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr16:g.48362208C>T COSM1265576 ESO-837 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr16:g.48362203C>T COSM971033 TCGA-A5-A0VQ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4707-5p aacttGCCGGGGCcc GCCCCGGC m8a Disrupted HPRO6_30686_G36346.1_48396107
hsa-miR-874-5p aacttgcTGGGGCCc CGGCCCCA m7b Created HPRO6_30686_G36346.1_48396107
hsa-miR-4707-5p aacttGCCGGGGCcc GCCCCGGC m8a Disrupted HPRO6_30686_G36346.1_48396107
hsa-miR-874-5p aacttgcTGGGGCCc CGGCCCCA m7b Created HPRO6_30686_G36346.1_48396107

Mutation Mutation ID Sample Name Cancer Type
chr16:g.48362198C>T COSM2833187 LS180 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-5p gccGGGGCCCTttgg AGGGCCCC m8a Disrupted HPRO6_30686_G36346.1_48396107
hsa-miR-4707-5p GCCGGGGCcctttgg GCCCCGGC m8a Disrupted HPRO6_30686_G36346.1_48396107
hsa-miR-6816-3p gccggGGTCCTTtgg GAAGGACC m7b Created HPRO6_30686_G36346.1_48396107
hsa-miR-7160-3p gccgGGGCCCTttgg CAGGGCCC m7b Disrupted HPRO6_30686_G36346.1_48396107
hsa-miR-296-5p gccGGGGCCCTttgg AGGGCCCC m8a Disrupted HPRO6_30686_G36346.1_48396107
hsa-miR-4707-5p GCCGGGGCcctttgg GCCCCGGC m8a Disrupted HPRO6_30686_G36346.1_48396107
hsa-miR-6816-3p gccggGGTCCTTtgg GAAGGACC m7b Created HPRO6_30686_G36346.1_48396107
hsa-miR-7160-3p gccgGGGCCCTttgg CAGGGCCC m7b Disrupted HPRO6_30686_G36346.1_48396107

Mutation Mutation ID Sample Name Cancer Type
chr16:g.48361957C>A COSM971026 TCGA-A5-A0VP-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p tacaaCCCTACAggg AUGUAGGG m7b Disrupted HPRO6_30685_G36344.1_48395864
hsa-miR-218-2-3p tacAACCATacaggg CAUGGUUC m6b Created HPRO6_30685_G36344.1_48395864
hsa-miR-296-3p taCAACCCTacaggg GAGGGUUG m7b (m7b->m6b) HPRO6_30685_G36344.1_48395864
hsa-miR-584-5p tacAACCATAcaggg UUAUGGUU m7b Created HPRO6_30685_G36344.1_48395864
hsa-miR-758-5p taCAACCATacaggg GAUGGUUG m7b (m6b->m7b) HPRO6_30685_G36344.1_48395864
hsa-miR-135b-3p tacaaCCCTACAggg AUGUAGGG m7b Disrupted HPRO6_30685_G36344.1_48395864
hsa-miR-218-2-3p tacAACCATacaggg CAUGGUUC m6b Created HPRO6_30685_G36344.1_48395864
hsa-miR-296-3p taCAACCCTacaggg GAGGGUUG m7b (m7b->m6b) HPRO6_30685_G36344.1_48395864
hsa-miR-584-5p tacAACCATAcaggg UUAUGGUU m7b Created HPRO6_30685_G36344.1_48395864
hsa-miR-758-5p taCAACCATacaggg GAUGGUUG m7b (m6b->m7b) HPRO6_30685_G36344.1_48395864

Mutation Mutation ID Sample Name Cancer Type
chr16:g.48361915C>G COSM4437937 472 [large_intestine][NS][adenoma][tubular]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4699-5p cattAATCTTCctgg AGAAGAUU m7b Disrupted HPRO6_30684_G36343.1_48395834
hsa-miR-873-5p cattaatGTTCCTGg GCAGGAAC m7b Created HPRO6_30684_G36343.1_48395834
hsa-miR-4699-5p cattAATCTTCctgg AGAAGAUU m7b Disrupted HPRO6_30684_G36343.1_48395834
hsa-miR-873-5p cattaatGTTCCTGg GCAGGAAC m7b Created HPRO6_30684_G36343.1_48395834
Mutation Mutation ID Sample Name Cancer Type
chr16:g.48361760C>T COSM2833166 1N40-VS-1T40 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr16:g.48361739T>C COSM3370447 TCGA-DO-A2HM-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6078 atggtcaCAGGCGac CCGCCUGA m6b Created HPRO6_30683_G36342.1_48395642
hsa-miR-6808-3p atGGTCACAggcgac GUGUGACC m7b (m6b->m7b) HPRO6_30683_G36342.1_48395642
hsa-miR-6811-3p atggtCACAGGCgac AGCCUGUG m7b Created HPRO6_30683_G36342.1_48395642
hsa-miR-6078 atggtcaCAGGCGac CCGCCUGA m6b Created HPRO6_30683_G36342.1_48395642
hsa-miR-6808-3p atGGTCACAggcgac GUGUGACC m7b (m6b->m7b) HPRO6_30683_G36342.1_48395642
hsa-miR-6811-3p atggtCACAGGCgac AGCCUGUG m7b Created HPRO6_30683_G36342.1_48395642

Mutation Mutation ID Sample Name Cancer Type
chr16:g.48361736G>A COSM4558953 CSCC-40-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1181 gtcataGGCGACGat CCGUCGCC m7b Disrupted HPRO6_30683_G36342.1_48395642
hsa-miR-1181 gtcataGGCGACGat CCGUCGCC m7b Disrupted HPRO6_30683_G36342.1_48395642

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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