SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001005918
Gene Symbol: ATP7B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.51974170G>A COSM1477282 TCGA-D8-A1XY-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-541-3p cCCCACCAagaaacc UGGUGGGC m7a Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-578 ccccacCAAGAAacc CUUCUUGU m6b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-654-5p cCCCACCAagaaacc UGGUGGGC m7a Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-6769b-5p cCCCACCAagaaacc UGGUGGGU m7a Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-8088 ccccACCGAGaaacc CCUCGGUA m6b Disrupted HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284

Mutation Mutation ID Sample Name Cancer Type
chr13:g.51974161G>A COSM3469270 TCGA-EE-A2GC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-1-5p gAAACCAGgtccagg GCUGGUUU m7b Disrupted HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-29b-2-5p GAAACCAGgtccagg CUGGUUUC m8a Disrupted HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-3661 gaaaCCAGGTCcagg UGACCUGG m7b Disrupted HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-378a-3p gaaaccaAGTCCAGg ACUGGACU m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-378b gaaaccaAGTCCAGg ACUGGACU m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-378c gaaaccaAGTCCAGg ACUGGACU m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-378d gaaaccaAGTCCAGg ACUGGACU m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-378e gaaaccaAGTCCAGg ACUGGACU m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-378f gaaaccaAGTCCAGg ACUGGACU m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-378h gaaaccaAGTCCAGg ACUGGACU m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-378i gaaaccaAGTCCAGg ACUGGACU m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-422a gaaaccaAGTCCAGg ACUGGACU m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-4535 gaaaccAGGTCCAgg GUGGACCU m7b Disrupted HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-492 gaaacCAGGTCCagg AGGACCUG m7b Disrupted HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-5009-5p gaaaccAAGTCCAgg UUGGACUU m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-631 gaaaCCAGGTCcagg AGACCUGG m7b Disrupted HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-659-5p gaaaccAGGTCCagg AGGACCUU m6b Disrupted HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-8058 gaaaccAAGTCCAGg CUGGACUU m8a Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284

Mutation Mutation ID Sample Name Cancer Type
chr13:g.51974136C>T COSM1493178 TCGA-A3-3346-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-17-5p tacCACTTTGattgc CAAAGUGC m7a Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-20b-5p tacCACTTTGattgc CAAAGUGC m7a Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-3609 tacCACTTTGattgc CAAAGUGA m7a Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-3973 taccACTTTGattgc ACAAAGUA m6b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-4796-3p taCCACTTTgattgc UAAAGUGG m7b (m6b->m7b) HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-519d-3p tacCACTTTGattgc CAAAGUGC m7a Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-520g-3p tacCACTTTGattgc ACAAAGUG m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-520h tacCACTTTGattgc ACAAAGUG m7b Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-5586-3p tacCACTCTGattgc CAGAGUGA m7a Disrupted HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-759 tacCACTCTGattgc GCAGAGUG m7b Disrupted HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284
hsa-miR-93-5p tacCACTTTGattgc CAAAGUGC m7a Created HHKTA_47843_NM_000053|1204|1243|1.47110999575974|0.161594046140284

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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