SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001005463
Gene Symbol: EBF3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.129886378A>G COSN6947673 8066067 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-933 gcttTGCGCACAtgt UGUGCGCA m8a Created HPRO6_13517_G15706.1_131684634
hsa-miR-548aw gcTTTGCACacatgt GUGCAAAA m7a (m7a->m6a) HPRO6_13517_G15706.1_131684634
hsa-miR-527 gCTTTGCAcacatgt CUGCAAAG m7b Disrupted HPRO6_13517_G15706.1_131684634
hsa-miR-518a-5p gCTTTGCAcacatgt CUGCAAAG m7b Disrupted HPRO6_13517_G15706.1_131684634
hsa-let-7i-3p gctTTGCGCAcatgt CUGCGCAA m7b Created HPRO6_13517_G15706.1_131684634
hsa-miR-19b-3p gcTTTGCACAcatgt UGUGCAAA m8a Disrupted HPRO6_13517_G15706.1_131684634
hsa-miR-19a-3p gcTTTGCACAcatgt UGUGCAAA m8a Disrupted HPRO6_13517_G15706.1_131684634

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser