SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001005417
Gene Symbol: B4GALT2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.43990315A>C COSM3677702 SNUH_G15_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5087 attCAAACCacgaag GGGUUUGU m6b Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-3677-3p attcaaaCCACGAag CUCGUGGG m6b Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-2052 atTCAAAACAcgaag UGUUUUGA m8a Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19b-2-5p attCAAAACacgaag AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-3677-3p attcaaaCCACGAag CUCGUGGG m6b Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-5087 attCAAACCacgaag GGGUUUGU m6b Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19b-1-5p attCAAAACacgaag AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-2052 atTCAAAACAcgaag UGUUUUGA m8a Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19b-2-5p attCAAAACacgaag AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19b-1-5p attCAAAACacgaag AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19a-5p attCAAAACacgaag AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19a-5p attCAAAACacgaag AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841

Mutation Mutation ID Sample Name Cancer Type
chr1:g.43990311C>A COSM3677701 SNUH_G15_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19b-1-5p caagattCAAAACac AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19a-5p caagattCAAAACac AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19b-2-5p caagattCAAAACac AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-2052 caagatTCAAAACAc UGUUUUGA m8a Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19b-1-5p caagattCAAAACac AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19b-2-5p caagattCAAAACac AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-2052 caagatTCAAAACAc UGUUUUGA m8a Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-19a-5p caagattCAAAACac AGUUUUGC m6b Disrupted HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841

Mutation Mutation ID Sample Name Cancer Type
chr1:g.43990304C>A COSM3677699 SNUH_G15_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30d-5p gGTTTACAaagattc UGUAAACA m7a Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-30c-5p gGTTTACAaagattc UGUAAACA m7a Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-30b-5p gGTTTACAaagattc UGUAAACA m7a Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-30a-5p gGTTTACAaagattc UGUAAACA m7a Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-6844 ggtttACAAAGAttc UUCUUUGU m7b Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-30e-5p gGTTTACAaagattc UGUAAACA m7a Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841
hsa-miR-6844 ggtttACAAAGAttc UUCUUUGU m7b Created HHHNE_1760_B4GALT2|NM_001005417|exon_CDS|-4.18048901960149|1.0285023650841

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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