SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001005291
Gene Symbol: SREBF1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.17816452G>A COSM4807053 PCSI_0297_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1910-5p tgggtAGGACTGagc CCAGUCCU m7b Disrupted HPKTA_27006_G29039.1_17719763
hsa-miR-3168 tgggTAGAACTgagc GAGUUCUA m7b Created HPKTA_27006_G29039.1_17719763
hsa-miR-4264 tgggtagGACTGAGc ACUCAGUC m7b Disrupted HPKTA_27006_G29039.1_17719763
hsa-miR-4277 tgggtAGAACTGagc GCAGUUCU m7b Created HPKTA_27006_G29039.1_17719763
hsa-miR-455-3p tgggtaGGACTGagc GCAGUCCA m6b Disrupted HPKTA_27006_G29039.1_17719763
hsa-miR-6874-3p tgggtAGAACTGagc CAGUUCUG m7a Created HPKTA_27006_G29039.1_17719763
hsa-miR-1910-5p tgggtAGGACTGagc CCAGUCCU m7b Disrupted HPKTA_27006_G29039.1_17719763
hsa-miR-3168 tgggTAGAACTgagc GAGUUCUA m7b Created HPKTA_27006_G29039.1_17719763
hsa-miR-4264 tgggtagGACTGAGc ACUCAGUC m7b Disrupted HPKTA_27006_G29039.1_17719763
hsa-miR-4277 tgggtAGAACTGagc GCAGUUCU m7b Created HPKTA_27006_G29039.1_17719763
hsa-miR-455-3p tgggtaGGACTGagc GCAGUCCA m6b Disrupted HPKTA_27006_G29039.1_17719763
hsa-miR-6874-3p tgggtAGAACTGagc CAGUUCUG m7a Created HPKTA_27006_G29039.1_17719763

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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