SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001005291
Gene Symbol: SREBF1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.17817042C>T COSM4634163 HCT8 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6511b-3p ttgtctaTGGTGAGc CCUCACCA m7b Created HHKTA_48531_NM_001005291|1974|2013|1.42784205470798|0.52144325303026
hsa-miR-6511a-3p ttgtctaTGGTGAGc CCUCACCA m7b Created HHKTA_48531_NM_001005291|1974|2013|1.42784205470798|0.52144325303026
hsa-miR-6511b-3p ttgtctaTGGTGAGc CCUCACCA m7b Created HHKTA_48531_NM_001005291|1974|2013|1.42784205470798|0.52144325303026
hsa-miR-6511a-3p ttgtctaTGGTGAGc CCUCACCA m7b Created HHKTA_48531_NM_001005291|1974|2013|1.42784205470798|0.52144325303026

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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