SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001004431
Gene Symbol: METRNL

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr17:g.83094780T>A COSN8676071 SS6003121 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-208a-5p ttggAAAAGCTgtaa GAGCUUUU m7b Created HHHNA_10980_METRNL|NM_001004431|exon_utr3|-0.0472693158955639|1.42241865891666
hsa-miR-208b-5p ttggAAAAGCTgtaa AAGCUUUU m7b Created HHHNA_10980_METRNL|NM_001004431|exon_utr3|-0.0472693158955639|1.42241865891666
hsa-miR-3120-3p ttggaaaTGCTGTaa CACAGCAA m6b Disrupted HHHNA_10980_METRNL|NM_001004431|exon_utr3|-0.0472693158955639|1.42241865891666
hsa-miR-4310 ttggaAATGCTGtaa GCAGCAUU m7b Disrupted HHHNA_10980_METRNL|NM_001004431|exon_utr3|-0.0472693158955639|1.42241865891666
hsa-miR-7157-5p ttggaAATGCTGtaa UCAGCAUU m7b Disrupted HHHNA_10980_METRNL|NM_001004431|exon_utr3|-0.0472693158955639|1.42241865891666

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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