SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001004354
Gene Symbol: NRARP

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr9:g.137301605G>A COSM753039 TCGA-34-5236-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.137301585G>A COSM1314667 TCGA-GD-A2C5-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7112-3p ggccgGTGATGCccg UGCAUCAC m7b Disrupted HHHNE_12583_NRARP|NM_001004354|exon_utr3|-4.83955867012706|0.546111613708794
hsa-miR-181d-3p ggCCGGTGatgcccg CCACCGGG m6b Disrupted HHHNE_12583_NRARP|NM_001004354|exon_utr3|-4.83955867012706|0.546111613708794

Mutation Mutation ID Sample Name Cancer Type
chr9:g.137300378T>C COSN6382256 RK193_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5583-3p CCATATTCatatttt GAAUAUGG m8a Created HHHNE_12570_NRARP|NM_001004354|exon_utr3|-5.13379237979741|-0.317740012758088
hsa-miR-4517 ccatatTCATATTTt AAAUAUGA m8a Created HHHNE_12570_NRARP|NM_001004354|exon_utr3|-5.13379237979741|-0.317740012758088

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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