SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001004304
Gene Symbol: ZNF740

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.53187586T>C COSM431373 TCGA-A1-A0SD-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-620 tttTCTCCATaggcg AUGGAGAU m7a Created HPRO6_18069_G21131.1_53581364
hsa-miR-5703 ttTTCTCCataggcg AGGAGAAG m6b Created HPRO6_18069_G21131.1_53581364
hsa-miR-539-5p tTTTCTCCataggcg GGAGAAAU m7a Created HPRO6_18069_G21131.1_53581364
hsa-miR-4531 ttTTCTCCATaggcg AUGGAGAA m8a Created HPRO6_18069_G21131.1_53581364
hsa-miR-4516 ttTTCTCCataggcg GGGAGAAG m6b Created HPRO6_18069_G21131.1_53581364
hsa-miR-4434 ttTTCTCCataggcg AGGAGAAG m6b Created HPRO6_18069_G21131.1_53581364
hsa-miR-3976 tttTCTCTATAggcg UAUAGAGA m8a Disrupted HPRO6_18069_G21131.1_53581364
hsa-miR-3925-5p ttTTCTCTataggcg AAGAGAAC m6b Disrupted HPRO6_18069_G21131.1_53581364
hsa-miR-3123 ttTTCTCTataggcg CAGAGAAU m6b Disrupted HPRO6_18069_G21131.1_53581364

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser