SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001004301
Gene Symbol: ZNF813

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.53491876T>G COSM1293828 TCGA-DS-A1OD-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4768-5p ctgGAGAGAAacctt AUUCUCUC m7b Created HPRO6_39233_G46426.1_53995115
hsa-miR-6809-3p ctggAGAGAAacctt CUUCUCUU m6b Created HPRO6_39233_G46426.1_53995115
hsa-miR-6833-3p ctgGAGAGAAAcctt UUUCUCUC m8a Created HPRO6_39233_G46426.1_53995115
hsa-miR-6845-3p ctGGAGAGaaacctt CCUCUCCU m6b Created HPRO6_39233_G46426.1_53995115
hsa-miR-6873-3p ctgGAGAGAAacctt UUCUCUCU m7a Created HPRO6_39233_G46426.1_53995115

Mutation Mutation ID Sample Name Cancer Type
chr19:g.53491872G>C COSM567554 TCGA-50-5933-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1184 cataCTGCAGataaa CCUGCAGC m6b Created HPRO6_39233_G46426.1_53995115
hsa-miR-16-1-3p cATACTGGagataaa CCAGUAUU m7a Disrupted HPRO6_39233_G46426.1_53995115
hsa-miR-17-3p catACTGCAGataaa ACUGCAGU m7b Created HPRO6_39233_G46426.1_53995115
hsa-miR-3158-5p cataCTGCAGataaa CCUGCAGA m6b Created HPRO6_39233_G46426.1_53995115
hsa-miR-3925-3p catACTGGAGataaa ACUCCAGU m7b Disrupted HPRO6_39233_G46426.1_53995115
hsa-miR-4686 catactGCAGATAaa UAUCUGCU m7a Created HPRO6_39233_G46426.1_53995115
hsa-miR-766-3p cataCTGGAGataaa ACUCCAGC m6b Disrupted HPRO6_39233_G46426.1_53995115

Mutation Mutation ID Sample Name Cancer Type
chr19:g.53491871G>A COSM50818 Co74 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1251-5p tcataCTAGAGataa ACUCUAGC m6b Created HPRO6_39233_G46426.1_53995115
hsa-miR-16-1-3p tcATACTGGagataa CCAGUAUU m7a (m7a->m6a) HPRO6_39233_G46426.1_53995115
hsa-miR-325 tcaTACTAGagataa CCUAGUAG m6b Created HPRO6_39233_G46426.1_53995115
hsa-miR-3675-3p tcatacTAGAGATaa CAUCUCUA m7b Created HPRO6_39233_G46426.1_53995115
hsa-miR-3925-3p tcatACTGGAGataa ACUCCAGU m7b Disrupted HPRO6_39233_G46426.1_53995115
hsa-miR-517-5p tcataCTAGAGataa CCUCUAGA m6b Created HPRO6_39233_G46426.1_53995115
hsa-miR-766-3p tcataCTGGAGataa ACUCCAGC m6b Disrupted HPRO6_39233_G46426.1_53995115
hsa-miR-1251-5p tcataCTAGAGataa ACUCUAGC m6b Created HPRO6_39233_G46426.1_53995115
hsa-miR-16-1-3p tcATACTGGagataa CCAGUAUU m7a (m7a->m6a) HPRO6_39233_G46426.1_53995115
hsa-miR-325 tcaTACTAGagataa CCUAGUAG m6b Created HPRO6_39233_G46426.1_53995115
hsa-miR-3675-3p tcatacTAGAGATaa CAUCUCUA m7b Created HPRO6_39233_G46426.1_53995115
hsa-miR-3925-3p tcatACTGGAGataa ACUCCAGU m7b Disrupted HPRO6_39233_G46426.1_53995115
hsa-miR-517-5p tcataCTAGAGataa CCUCUAGA m6b Created HPRO6_39233_G46426.1_53995115
hsa-miR-766-3p tcataCTGGAGataa ACUCCAGC m6b Disrupted HPRO6_39233_G46426.1_53995115

Mutation Mutation ID Sample Name Cancer Type
chr19:g.53490734A>G COSM1000857 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-499b-5p gAAGTCTGTcaacga ACAGACUU m8a (m7a->m8a) HPRO6_39232_G46425.1_53993994

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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