SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001004127
Gene Symbol: ALG11

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.52028367C>T COSM4215525 CSCC-40-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219a-2-3p cACAATTCggggggc AGAAUUGU m7b Disrupted HPRO6_22514_G26284.1_52602497

Mutation Mutation ID Sample Name Cancer Type
chr13:g.52018936C>A COSM4633834 HCT8 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4641 ttcttcCATGGGCtc UGCCCAUG m7b Created HPRO6_22504_G26274.1_52593074
hsa-miR-9500 ttCTTCCCTgggctc AAGGGAAG m7b (m7b->m6b) HPRO6_22504_G26274.1_52593074
hsa-miR-7113-5p ttctTCCCTGGgctc UCCAGGGA m7b Disrupted HPRO6_22504_G26274.1_52593074
hsa-miR-6764-5p ttcttCCCTGGGctc UCCCAGGG m7b Disrupted HPRO6_22504_G26274.1_52593074
hsa-miR-1915-3p ttcttCCCTGGGctc CCCCAGGG m7b Disrupted HPRO6_22504_G26274.1_52593074

Mutation Mutation ID Sample Name Cancer Type
chr13:g.52018913G>T COSM3744030 RK123_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548aq-3p atttcAGTTTTTttt CAAAAACU m7b Created HPRO6_22504_G26274.1_52593074
hsa-miR-548am-3p atttcAGTTTTTttt CAAAAACU m7b Created HPRO6_22504_G26274.1_52593074
hsa-miR-548aj-3p atttcAGTTTTTttt UAAAAACU m7b Created HPRO6_22504_G26274.1_52593074
hsa-miR-548ah-3p atttcAGTTTTTttt CAAAAACU m7b Created HPRO6_22504_G26274.1_52593074
hsa-miR-548ae-3p atttcAGTTTTTttt CAAAAACU m7b Created HPRO6_22504_G26274.1_52593074
hsa-miR-548ac atttcaGGTTTTTtt CAAAAACC m7b Disrupted HPRO6_22504_G26274.1_52593074
hsa-miR-548a-3p atttCAGTTTTtttt CAAAACUG m7b Created HPRO6_22504_G26274.1_52593074
hsa-miR-548z atttcaGGTTTTTtt CAAAAACC m7b Disrupted HPRO6_22504_G26274.1_52593074
hsa-miR-548x-3p atttcAGTTTTTttt UAAAAACU m7b Created HPRO6_22504_G26274.1_52593074
hsa-miR-548j-3p atttcAGTTTTTttt CAAAAACU m7b Created HPRO6_22504_G26274.1_52593074
hsa-miR-548h-3p atttcaGGTTTTTtt CAAAAACC m7b Disrupted HPRO6_22504_G26274.1_52593074
hsa-miR-548ar-3p atttCAGTTTTtttt UAAAACUG m7b Created HPRO6_22504_G26274.1_52593074
hsa-miR-548f-3p atttCAGTTTTTttt AAAAACUG m8a Created HPRO6_22504_G26274.1_52593074
hsa-miR-548e-3p atttCAGTTTTTttt AAAAACUG m8a Created HPRO6_22504_G26274.1_52593074
hsa-miR-548d-3p atttcaGGTTTTTtt CAAAAACC m7b Disrupted HPRO6_22504_G26274.1_52593074
hsa-miR-548bb-3p atttcaGGTTTTTtt CAAAAACC m7b Disrupted HPRO6_22504_G26274.1_52593074
hsa-miR-548az-3p atttCAGTTTTTttt AAAAACUG m8a Created HPRO6_22504_G26274.1_52593074

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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