SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001004127
Gene Symbol: ALG11

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr13:g.52019006A>G COSM4980955 3N34-VS-3T34 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-497-5p TGCTGCTGcagagaa CAGCAGCA m8a Created HPKMB_2154_G2436.1_52593125
hsa-miR-6728-3p tgctgctGCAGAGAa UCUCUGCU m7a Created HPKMB_2154_G2436.1_52593125
hsa-miR-7156-3p tgctGCTGCAGagaa CUGCAGCC m7a Created HPKMB_2154_G2436.1_52593125
hsa-miR-761 tgCTGCTGCagagaa GCAGCAGG m7a (m6a->m7a) HPKMB_2154_G2436.1_52593125
hsa-miR-922 tgCTGCTGCagagaa GCAGCAGA m7a (m6a->m7a) HPKMB_2154_G2436.1_52593125
hsa-miR-195-5p TGCTGCTAcagagaa UAGCAGCA m8a Disrupted HPKMB_2154_G2436.1_52593125
hsa-miR-107 tgcTGCTGCagagaa AGCAGCAU m6b Created HPKMB_2154_G2436.1_52593125
hsa-miR-1184 tgctGCTGCAGagaa CCUGCAGC m7b Created HPKMB_2154_G2436.1_52593125
hsa-miR-15a-5p TGCTGCTAcagagaa UAGCAGCA m8a Disrupted HPKMB_2154_G2436.1_52593125
hsa-miR-15b-5p TGCTGCTAcagagaa UAGCAGCA m8a Disrupted HPKMB_2154_G2436.1_52593125
hsa-miR-16-5p TGCTGCTAcagagaa UAGCAGCA m8a Disrupted HPKMB_2154_G2436.1_52593125
hsa-miR-17-3p tgctgCTGCAGagaa ACUGCAGU m6b Created HPKMB_2154_G2436.1_52593125
hsa-miR-103a-3p tgcTGCTGCagagaa AGCAGCAU m6b Created HPKMB_2154_G2436.1_52593125
hsa-miR-20b-3p tgctgCTACAGagaa ACUGUAGU m6b Disrupted HPKMB_2154_G2436.1_52593125
hsa-miR-3137 tgctGCTACAGAgaa UCUGUAGC m8a Disrupted HPKMB_2154_G2436.1_52593125
hsa-miR-3158-5p tgctgCTGCAGagaa CCUGCAGA m6b Created HPKMB_2154_G2436.1_52593125

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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