SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001003940
Gene Symbol: BMF

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.40105945C>T COSM961096 TCGA-D1-A165-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6507-3p ccGACTTTagctctt CAAAGUCC m6b Created HPSD3_3597_G4799.1_40398148
hsa-miR-3160-3p ccgactTCAGCTCTt AGAGCUGA m8a Disrupted HPSD3_3597_G4799.1_40398148
hsa-miR-610 ccgactTTAGCTCtt UGAGCUAA m7b Created HPSD3_3597_G4799.1_40398148

Mutation Mutation ID Sample Name Cancer Type
chr15:g.40105943G>T COSM1372601 TCGA-A6-6781-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-3p gactTCATCTCttcc UGAGAUGA m7b Created HPSD3_3597_G4799.1_40398148
hsa-miR-3160-3p gactTCAGCTCTtcc AGAGCUGA m8a Disrupted HPSD3_3597_G4799.1_40398148
hsa-miR-4770 gactTCATCTCttcc UGAGAUGA m7b Created HPSD3_3597_G4799.1_40398148
hsa-miR-6088 gactTCATCTCTtcc AGAGAUGA m8a Created HPSD3_3597_G4799.1_40398148

Mutation Mutation ID Sample Name Cancer Type
chr15:g.40105934CT>T COSM88719 OCC06PT [ovary][NS][carcinoma][clear_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6077 CTCTTCCCtctcaccc GGGAAGAG m8a Disrupted HPSD3_3597_G4799.1_40398148
hsa-miR-3916 ctcTTCCTCTcaccc AAGAGGAA m7b Created HPSD3_3597_G4799.1_40398148
hsa-miR-3125 ctcTTCCTCTcaccc UAGAGGAA m7b Created HPSD3_3597_G4799.1_40398148
hsa-miR-9500 ctCTTCCCTctcaccc AAGGGAAG m7b (m7b->m6b) HPSD3_3597_G4799.1_40398148
hsa-miR-6873-5p ctctTCCCTCTcaccc CAGAGGGA m7b Disrupted HPSD3_3597_G4799.1_40398148
hsa-miR-6859-5p ctcTTCCTCTCaccc GAGAGGAA m8a Created HPSD3_3597_G4799.1_40398148

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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