SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001003891
Gene Symbol: MED15

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.20585016G>A COSM1214837 587316 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5580-3p ccatcaCATATGTcc CACAUAUG m7b Created HPKMA_9613_G11126.1_20939330
hsa-miR-8070 ccATCACATatgtcc AUGUGAUU m7a (m6a->m7a) HPKMA_9613_G11126.1_20939330
hsa-miR-5580-3p ccatcaCATATGTcc CACAUAUG m7b Created HPKMA_9613_G11126.1_20939330
hsa-miR-8070 ccATCACATatgtcc AUGUGAUU m7a (m6a->m7a) HPKMA_9613_G11126.1_20939330

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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