SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001003800
Gene Symbol: BICD2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.92719406G>A COSM3659568 TCGA-EE-A29L-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6868-3p acaacgAGAAGGAcc UUCCUUCU m7b Disrupted HHKTA_52590_NM_001003800|1278|1317|1.29803823155271|0.42610408932285
hsa-miR-1248 acaacgAGAAGGacc ACCUUCUU m6b Disrupted HHKTA_52590_NM_001003800|1278|1317|1.29803823155271|0.42610408932285
hsa-miR-6868-3p acaacgAGAAGGAcc UUCCUUCU m7b Disrupted HHKTA_52590_NM_001003800|1278|1317|1.29803823155271|0.42610408932285
hsa-miR-1248 acaacgAGAAGGacc ACCUUCUU m6b Disrupted HHKTA_52590_NM_001003800|1278|1317|1.29803823155271|0.42610408932285

Mutation Mutation ID Sample Name Cancer Type
chr9:g.92712526A>G COSN2333889 RK209_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-96-5p ttGTGCCAAAttgtg UUUGGCAC m8a Disrupted HHKTA_10886_NM_001003800|5253|5292|6.14404762934951|0.42610408932285
hsa-miR-1271-5p ttGTGCCAAattgtg CUUGGCAC m7b (m7b->m6b) HHKTA_10886_NM_001003800|5253|5292|6.14404762934951|0.42610408932285

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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