SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001003694
Gene Symbol: BRPF1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.9747467C>T COSN9896873 C0079T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-499a-5p ccAGTCTTAggggaa UUAAGACU m7b (m6b->m7b) HPKMA_9949_G11519.2_9789142
hsa-miR-4432 ccAGTCTTaggggaa AAAGACUC m6b Created HPKMA_9949_G11519.2_9789142
hsa-miR-6801-3p ccagtctCAGGGGaa ACCCCUGC m6b Disrupted HPKMA_9949_G11519.2_9789142
hsa-miR-6810-3p ccagtctCAGGGGAa UCCCCUGC m7a Disrupted HPKMA_9949_G11519.2_9789142
hsa-miR-6864-3p ccAGTCTCAggggaa GUGAGACU m7b (m7b->m6b) HPKMA_9949_G11519.2_9789142
hsa-miR-8087 ccAGTCTTaggggaa GAAGACUU m6b Created HPKMA_9949_G11519.2_9789142
hsa-miR-125a-5p ccagtCTCAGGGgaa UCCCUGAG m7b Disrupted HPKMA_9949_G11519.2_9789142
hsa-miR-125b-5p ccagtCTCAGGGgaa UCCCUGAG m7b Disrupted HPKMA_9949_G11519.2_9789142
hsa-miR-331-3p ccagtctCAGGGGaa GCCCCUGG m6b Disrupted HPKMA_9949_G11519.2_9789142
hsa-miR-3672 ccAGTCTCAggggaa AUGAGACU m7b (m7b->m6b) HPKMA_9949_G11519.2_9789142
hsa-miR-4319 ccagtCTCAGGGgaa UCCCUGAG m7b Disrupted HPKMA_9949_G11519.2_9789142
hsa-miR-4324 ccagTCTCAGGGgaa CCCUGAGA m8a Disrupted HPKMA_9949_G11519.2_9789142
hsa-miR-4329 ccaGTCTCAGGggaa CCUGAGAC m8a Disrupted HPKMA_9949_G11519.2_9789142

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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