SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001003690
Gene Symbol: MAD2L1BP

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr6:g.43640340C>T COSM4506767 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.43640337G>A COSM3430697 TCGA-EI-6882-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3912-5p ctcATGGACAccgtc AUGUCCAU m7b Created HPRO6_65625_G78348.1_43608079
hsa-miR-4641 ctCATGGGCAccgtc UGCCCAUG m8a Disrupted HPRO6_65625_G78348.1_43608079

Mutation Mutation ID Sample Name Cancer Type
chr6:g.43636605T>C COSM1697278 YUWAND [skin][mucosal][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376b-3p tctgccCTATGAaca AUCAUAGA m6b Disrupted HPRO6_65622_G78345.1_43604345
hsa-miR-376a-3p tctgccCTATGAaca AUCAUAGA m6b Disrupted HPRO6_65622_G78345.1_43604345
hsa-miR-3675-5p tctGCCCCATgaaca UAUGGGGC m7b Created HPRO6_65622_G78345.1_43604345
hsa-miR-4436b-3p tCTGCCCTatgaaca CAGGGCAG m7b Disrupted HPRO6_65622_G78345.1_43604345
hsa-miR-4632-5p tCTGCCCTatgaaca GAGGGCAG m7b Disrupted HPRO6_65622_G78345.1_43604345
hsa-miR-6879-5p tCTGCCCTatgaaca CAGGGCAG m7b Disrupted HPRO6_65622_G78345.1_43604345
hsa-miR-6890-5p tctgCCCCATGaaca CAUGGGGU m7a Created HPRO6_65622_G78345.1_43604345
hsa-miR-7843-5p tCTGCCCTatgaaca GAGGGCAG m7b Disrupted HPRO6_65622_G78345.1_43604345
hsa-miR-1206 tctgcccCATGAACa UGUUCAUG m7b Created HPRO6_65622_G78345.1_43604345

Mutation Mutation ID Sample Name Cancer Type
chr6:g.43636578T>C COSM1257046 ESO-017 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6076 taTCATGCatcaacg AGCAUGAC m6b Created HPRO6_65621_G78344.1_43604309

Mutation Mutation ID Sample Name Cancer Type
chr6:g.43636437G>C COSM596557 TCGA-44-6777-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4465 acTACTTGAGacaag CUCAAGUA m8a Disrupted HPRO6_65619_G78342.1_43604188
hsa-miR-26b-5p acTACTTGAgacaag UUCAAGUA m7b (m7b->m6b) HPRO6_65619_G78342.1_43604188
hsa-miR-26a-5p acTACTTGAgacaag UUCAAGUA m7b (m7b->m6b) HPRO6_65619_G78342.1_43604188
hsa-miR-1297 acTACTTGAgacaag UUCAAGUA m7b (m7b->m6b) HPRO6_65619_G78342.1_43604188
hsa-miR-1231 actacttCAGACAag GUGUCUGG m6b Created HPRO6_65619_G78342.1_43604188
hsa-miR-513c-5p actaCTTGAGAcaag UUCUCAAG m7b Disrupted HPRO6_65619_G78342.1_43604188
hsa-miR-514b-5p actaCTTGAGAcaag UUCUCAAG m7b Disrupted HPRO6_65619_G78342.1_43604188
hsa-miR-548ao-5p acTACTTCagacaag AGAAGUAA m6b Created HPRO6_65619_G78342.1_43604188
hsa-miR-548ax acTACTTCagacaag AGAAGUAA m6b Created HPRO6_65619_G78342.1_43604188
hsa-miR-5697 aCTACTTGAgacaag UCAAGUAG m8a (m8a->m7a) HPRO6_65619_G78342.1_43604188
hsa-miR-573 actACTTCAGacaag CUGAAGUG m7a Created HPRO6_65619_G78342.1_43604188
hsa-miR-632 actacttCAGACAag GUGUCUGC m6b Created HPRO6_65619_G78342.1_43604188

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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