SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001002909
Gene Symbol: GPATCH8

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.44397936C>T COSM4972845 1N05-VS-1T05 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p catCCTACAacatca AUGUAGGG m6b Disrupted HPRT3_11500_G15216.1_42475312
hsa-miR-8065 caTCCTACAacatca UGUAGGAA m7a (m7a->m6a) HPRT3_11500_G15216.1_42475312

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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