SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001002909
Gene Symbol: GPATCH8

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.44400851C>T COSM3518082 TCGA-FS-A4F5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4311 aatttTCTCTTTCta GAAAGAGA m8a Created HHKTA_52496_NM_001002909|1266|1305|1.29803823155271|0.758309106789388
hsa-miR-4668-5p aaTTTTCCCTttcta AGGGAAAA m8a Disrupted HHKTA_52496_NM_001002909|1266|1305|1.29803823155271|0.758309106789388
hsa-miR-5584-5p aatTTTCCCTttcta CAGGGAAA m7b Disrupted HHKTA_52496_NM_001002909|1266|1305|1.29803823155271|0.758309106789388
hsa-miR-5681a aattttCCCTTTCTa AGAAAGGG m8a Disrupted HHKTA_52496_NM_001002909|1266|1305|1.29803823155271|0.758309106789388
hsa-miR-6730-5p aattttcCCTTTCTa AGAAAGGU m7a Disrupted HHKTA_52496_NM_001002909|1266|1305|1.29803823155271|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44400801A>G COSM1644638 06_2532 [salivary_gland][NS][carcinoma][adenoid_cystic_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p taatACTGCACaccc GGUGCAGU m7b Created HHKTA_21980_NM_001002909|1308|1347|3.3316314609853|0.758309106789388
hsa-miR-16-1-3p tAATACTGcacaccc CCAGUAUU m7b Created HHKTA_21980_NM_001002909|1308|1347|3.3316314609853|0.758309106789388
hsa-miR-3650 taatactACACACCc AGGUGUGU m7b Disrupted HHKTA_21980_NM_001002909|1308|1347|3.3316314609853|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44398664C>A COSM979964 TCGA-B5-A11N-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273f cccCCATCTCttggc GGAGAUGG m7b Disrupted HHKTA_23689_NM_001002909|3451|3490|3.11529175572651|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44398370GA>A COSM4615591 SNU-C4 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-5p ccCTGGGGAcccaacc AUCCCCAG m7b (m7b->m6b) HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-4281 ccctgGGGACCCaacc GGGUCCCG m7a Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-6764-5p CCCTGGGAcccaacc UCCCAGGG m8a Created HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-7977 ccCTGGGAcccaacc UUCCCAGC m6b Created HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44398345C>T COSM3518079 TCGA-EE-A2MD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-5p aCTACCTCcccgacc UGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-let-7b-5p aCTACCTCcccgacc UGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-let-7c-5p aCTACCTCcccgacc UGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-let-7d-5p aCTACCTCcccgacc AGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-let-7e-5p aCTACCTCcccgacc UGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-let-7f-5p aCTACCTCcccgacc UGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-let-7g-5p aCTACCTCcccgacc UGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-let-7i-5p aCTACCTCcccgacc UGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-3175 actacCTCCCCGacc CGGGGAGA m7a Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-425-3p actaccTTCCCGAcc AUCGGGAA m7b Created HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-4458 aCTACCTCcccgacc AGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-4500 aCTACCTCcccgacc UGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-4747-5p actaCCTTCCCgacc AGGGAAGG m7b Created HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-5196-5p actaCCTTCCCgacc AGGGAAGG m7b Created HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-6777-5p actacCTCCCCGacc ACGGGGAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-6799-5p actACCTCCCCgacc GGGGAGGU m8a Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-6825-5p actaCCTCCCCgacc UGGGGAGG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-6889-5p actacCTCCCCGAcc UCGGGGAG m8a Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388
hsa-miR-98-5p aCTACCTCcccgacc UGAGGUAG m7b Disrupted HHKTA_6421_NM_001002909|3760|3799|9.90835850085238|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44398237C>A COSM51912 PD2144a [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2110 atTTCCCCAgttatg UUGGGGAA m7b (m7b->m6b) HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3153 aTTTCCCCagttatg GGGGAAAG m7a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-4271 atTTCCCCagttatg GGGGGAAG m6b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-450a-1-3p atTTCCCAAgttatg AUUGGGAA m7b (m6b->m7b) HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-4667-5p attTCCCCAGTtatg ACUGGGGA m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-4700-5p attTCCCCAGttatg UCUGGGGA m7b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6733-5p aTTTCCCAagttatg UGGGAAAG m7a Created HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6739-5p aTTTCCCAagttatg UGGGAAAG m7a Created HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-8089 attTCCCCAGttatg CCUGGGGA m7b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44398223C>T COSM3518078 TCGA-EE-A3J5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273h-5p gcaCCTCCCAGtggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-149-3p gcaCCTCCCagtggg AGGGAGGG m6b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-181a-2-3p gcacctcTCAGTGGg ACCACUGA m7b Created HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-30b-3p gcaCCTCCCAGtggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3192-5p gcacCTCCCAGtggg UCUGGGAG m7b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3689a-3p gcaCCTCCCAGtggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3689b-3p gcaCCTCCCAGtggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3689c gcaCCTCCCAGtggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3689d gCACCTCCCagtggg GGGAGGUG m8a (m8a->m7a) HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6761-5p gcacCTCTCAGtggg UCUGAGAG m7b Created HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6779-5p gcaCCTCCCAGtggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6780a-5p gcaCCTCCCAgtggg UUGGGAGG m7b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6799-5p gcACCTCCCagtggg GGGGAGGU m7b (m7b->m6b) HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6851-5p gCACCTCCcagtggg AGGAGGUG m7b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6883-5p gcaCCTCCCagtggg AGGGAGGG m6b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44398222C>A COSM4902709 TCGA-GF-A6C9-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273h-5p caCCTCCCAGtgggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-149-3p caCCTCCCagtgggg AGGGAGGG m6b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-30b-3p caCCTCCCAGtgggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3192-5p cacCTCCCAGtgggg UCUGGGAG m7b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3614-5p cacctCCAAGTGGgg CCACUUGG m8a Created HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3689a-3p caCCTCCCAGtgggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3689b-3p caCCTCCCAGtgggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3689c caCCTCCCAGtgggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3689d CACCTCCCagtgggg GGGAGGUG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-432-5p cacCTCCAAGtgggg UCUUGGAG m7b Created HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6779-5p caCCTCCCAGtgggg CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6780a-5p caCCTCCCAgtgggg UUGGGAGG m7b (m7b->m6b) HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6799-5p cACCTCCCagtgggg GGGGAGGU m7b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6883-5p caCCTCCCagtgggg AGGGAGGG m6b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-890 caccTCCAAGTgggg UACUUGGA m7b Created HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44398220G>T COSM561014 TCGA-50-6590-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3689a-3p CCTCCCAGtggggat CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3689b-3p CCTCCCAGtggggat CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-3689c CCTCCCAGtggggat CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-4286 cctcccAGTGGGGat ACCCCACU m7b Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6779-5p CCTCCCAGtggggat CUGGGAGG m8a Disrupted HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388
hsa-miR-6871-5p cCTCCCATtggggat CAUGGGAG m7b Created HHKTA_30192_NM_001002909|3887|3926|2.46627263995016|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44397936C>T COSM4972845 1N05-VS-1T05 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p catCCTACAacatca AUGUAGGG m6b Disrupted HHKTA_42804_NM_001002909|4181|4220|1.77398558312204|0.758309106789388
hsa-miR-8065 caTCCTACAacatca UGUAGGAA m7a (m7a->m6a) HHKTA_42804_NM_001002909|4181|4220|1.77398558312204|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44397830T>G COSM979961 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3133 acccccaGTTCTTTg UAAAGAAC m7b Created HHKTA_38604_NM_001002909|4303|4342|1.99032528838083|0.758309106789388
hsa-miR-4511 acccccAGTTCTTtg GAAGAACU m7b Created HHKTA_38604_NM_001002909|4303|4342|1.99032528838083|0.758309106789388
hsa-miR-5680 accccCATTTCTttg GAGAAAUG m7b Disrupted HHKTA_38604_NM_001002909|4303|4342|1.99032528838083|0.758309106789388
hsa-miR-637 aCCCCCAGTtctttg ACUGGGGG m8a (m7a->m8a) HHKTA_38604_NM_001002909|4303|4342|1.99032528838083|0.758309106789388
hsa-miR-6803-5p ACCCCCAGttctttg CUGGGGGU m8a Created HHKTA_38604_NM_001002909|4303|4342|1.99032528838083|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44397827C>A COSM1208523 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5680 ccCATTTCTttgtcc GAGAAAUG m7b (m7b->m6b) HHKTA_38604_NM_001002909|4303|4342|1.99032528838083|0.758309106789388

Mutation Mutation ID Sample Name Cancer Type
chr17:g.44397785C>T COSM3691993 TCGA-CK-5916-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-5p caCCCTGCCAccttt UGGCAGGG m8a Disrupted HHKTA_28796_NM_001002909|4355|4394|2.59607646310543|0.758309106789388
hsa-miR-4736 cacCCTGCCaccttt AGGCAGGU m6b Disrupted HHKTA_28796_NM_001002909|4355|4394|2.59607646310543|0.758309106789388
hsa-miR-4763-3p caCCCTGCCaccttt AGGCAGGG m7b (m7b->m6b) HHKTA_28796_NM_001002909|4355|4394|2.59607646310543|0.758309106789388
hsa-miR-542-3p caccCTGTCACcttt UGUGACAG m7b Created HHKTA_28796_NM_001002909|4355|4394|2.59607646310543|0.758309106789388
hsa-miR-6815-5p caccctGCCACCTtt UAGGUGGC m7b Disrupted HHKTA_28796_NM_001002909|4355|4394|2.59607646310543|0.758309106789388
hsa-miR-6865-5p caccctGCCACCTtt UAGGUGGC m7b Disrupted HHKTA_28796_NM_001002909|4355|4394|2.59607646310543|0.758309106789388
hsa-miR-7150 cacCCTGCCAccttt CUGGCAGG m7b Disrupted HHKTA_28796_NM_001002909|4355|4394|2.59607646310543|0.758309106789388

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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