SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001002876
Gene Symbol: CENPM

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.41940162T>C COSM1416576 TCGA-A6-5665-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-188-3p ccgagTGTGGGActt CUCCCACA m7b Disrupted HHHNA_15843_CENPM|NM_001110215|exon_utr5|-2.63315375191287|0.0880122576978583
hsa-miR-4433a-5p ccgagtGTGGGACtt CGUCCCAC m7b Disrupted HHHNA_15843_CENPM|NM_001110215|exon_utr5|-2.63315375191287|0.0880122576978583
hsa-miR-5588-3p ccgagtgTGGGACTt AAGUCCCA m7b Disrupted HHHNA_15843_CENPM|NM_001110215|exon_utr5|-2.63315375191287|0.0880122576978583
Mutation Mutation ID Sample Name Cancer Type
chr22:g.41939167G>A COSM4634808 HCT8 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr22:g.41939165G>T COSM479016 TCGA-CZ-5469-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1911-3p gcgcagcGCCTGGTg CACCAGGC m7b Disrupted HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-28-5p gcgcAGCTCCTggtg AAGGAGCU m7b Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-3139 gcgcAGCTCCTggtg UAGGAGCU m7b Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-558 gcGCAGCTCctggtg UGAGCUGC m7b (m6b->m7b) HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-665 gcgcagCTCCTGGTg ACCAGGAG m8a Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-708-5p gcgcAGCTCCTggtg AAGGAGCU m7b Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-1911-3p gcgcagcGCCTGGTg CACCAGGC m7b Disrupted HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-28-5p gcgcAGCTCCTggtg AAGGAGCU m7b Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-3139 gcgcAGCTCCTggtg UAGGAGCU m7b Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-558 gcGCAGCTCctggtg UGAGCUGC m7b (m6b->m7b) HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-665 gcgcagCTCCTGGTg ACCAGGAG m8a Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-708-5p gcgcAGCTCCTggtg AAGGAGCU m7b Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435

Mutation Mutation ID Sample Name Cancer Type
chr22:g.41939130G>A COSM1200757 587278 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4253 tggccaCATGCCCgg AGGGCAUG m7b Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-6862-5p tggccaCATGCCCGg CGGGCAUG m8a Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-7108-5p tGGCCACAtgcccgg GUGUGGCC m7b Created HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435

Mutation Mutation ID Sample Name Cancer Type
chr22:g.41939126CC>C COSM4969276 SJHGG019_E [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181d-3p ccacgtgCCCGGTGtc CCACCGGG m7b Disrupted HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-181d-3p ccacgtgCCCGGTGtc CCACCGGG m7b Disrupted HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435

Mutation Mutation ID Sample Name Cancer Type
chr22:g.41939110G>A COSM3555002 TCGA-FS-A1ZD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6501-3p caGCTCTGaacctgc CCAGAGCA m6b Disrupted HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435
hsa-miR-6501-3p caGCTCTGaacctgc CCAGAGCA m6b Disrupted HHHNA_15842_CENPM|NM_001110215|exon_CDS|-1.65371773559815|1.64704189978435

Mutation Mutation ID Sample Name Cancer Type
chr22:g.41939068G>T COSM4156340 PTC-1C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4270 cCTCCCTGgaggacc UCAGGGAG m7b Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4441 cCTCCCTGgaggacc ACAGGGAG m7b Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4475 ccTCCCTTGaggacc CAAGGGAC m7a (m6a->m7a) HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4685-5p cctCCCTGGaggacc CCCAGGGC m6b Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4691-5p cctcccTGGAGGACc GUCCUCCA m8a Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4739 CCTCCCTTgaggacc AAGGGAGG m8a Created HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-6754-5p cCTCCCTGGaggacc CCAGGGAG m8a (m8a->m7a) HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-6792-3p cctcccTGGAGGAcc CUCCUCCA m7b Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-6837-5p cctCCCTGGaggacc ACCAGGGC m6b Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-7113-5p ccTCCCTGGAggacc UCCAGGGA m8a Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4270 cCTCCCTGgaggacc UCAGGGAG m7b Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4441 cCTCCCTGgaggacc ACAGGGAG m7b Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4475 ccTCCCTTGaggacc CAAGGGAC m7a (m6a->m7a) HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4685-5p cctCCCTGGaggacc CCCAGGGC m6b Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4691-5p cctcccTGGAGGACc GUCCUCCA m8a Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-4739 CCTCCCTTgaggacc AAGGGAGG m8a Created HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-6754-5p cCTCCCTGGaggacc CCAGGGAG m8a (m8a->m7a) HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-6792-3p cctcccTGGAGGAcc CUCCUCCA m7b Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-6837-5p cctCCCTGGaggacc ACCAGGGC m6b Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149
hsa-miR-7113-5p ccTCCCTGGAggacc UCCAGGGA m8a Disrupted HHHNA_15841_CENPM|NM_001002876|exon_utr3|-2.6556659700885|0.460178828025149

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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