SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001002264
Gene Symbol: EPSTI1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.42886548A>C COSN4735916 tumor_4135350 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][Burkitt_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-3p ttccACCATTTctat AAAAUGGU m7b Disrupted HPSLC_5657_G6720.1_43460696
hsa-miR-363-5p tTCCACCCtttctat CGGGUGGA m7b Created HPSLC_5657_G6720.1_43460696
hsa-miR-6730-5p ttccacCCTTTCTat AGAAAGGU m7a Created HPSLC_5657_G6720.1_43460696
hsa-miR-5681a ttccaCCCTTTCTat AGAAAGGG m8a Created HPSLC_5657_G6720.1_43460696
hsa-miR-5680 ttccacCATTTCTat GAGAAAUG m7b Disrupted HPSLC_5657_G6720.1_43460696
hsa-miR-522-3p ttccACCATTTctat AAAAUGGU m7b Disrupted HPSLC_5657_G6720.1_43460696

Mutation Mutation ID Sample Name Cancer Type
chr13:g.42886547T>A COSN4735915 tumor_4135350 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][Burkitt_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5680 tccacCATTTCTatg GAGAAAUG m7b Disrupted HPSLC_5657_G6720.1_43460696
hsa-miR-522-3p tccACCATTTctatg AAAAUGGU m7b Disrupted HPSLC_5657_G6720.1_43460696
hsa-miR-224-3p tccACCATTTctatg AAAAUGGU m7b Disrupted HPSLC_5657_G6720.1_43460696
hsa-miR-219b-3p tccacCAATTCTatg AGAAUUGC m7a Created HPSLC_5657_G6720.1_43460696
hsa-miR-219a-2-3p tccacCAATTCTatg AGAAUUGU m7a Created HPSLC_5657_G6720.1_43460696

Mutation Mutation ID Sample Name Cancer Type
chr13:g.42886546T>A COSN4735914 tumor_4135350 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][Burkitt_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-3p ccACCATTTctatgc AAAAUGGU m7b (m7b->m6b) HPSLC_5657_G6720.1_43460696
hsa-miR-522-3p ccACCATTTctatgc AAAAUGGU m7b (m7b->m6b) HPSLC_5657_G6720.1_43460696
hsa-miR-5680 ccacCATTTCTatgc GAGAAAUG m7b Disrupted HPSLC_5657_G6720.1_43460696

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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